WormBase Tree Display for Gene: WBGene00044421

WBGene00044421 SMap: S_parent: Sequence: D1007
  Identity: Version: 2
    Name: CGC_name: nssp-4 Person_evidence: WBPerson260
            WBPerson11490
            WBPerson33426
      Sequence_name: D1007.18
      Molecular_name: D1007.18
        D1007.18.1
        CE40197
      Other_name: CELE_D1007.18 Accession_evidence: NDB BX284601
      Public_name: nssp-4
    DB_info: Database: AceView gene D1007.18
        WormFlux gene WBGene00044421
        NDB locus_tag CELE_D1007.18
        NCBI gene 3565784
        RefSeq protein NM_001025899.3
        TrEMBL UniProtAcc Q4W529
        UniProt_GCRP UniProtAcc Q4W529
    Species: Caenorhabditis elegans
    History: Version_change: 1 01 Jun 2005 10:13:42 WBPerson2970 Event: Created
        2 14 Jan 2025 23:38:50 WBPerson51134 Name_change: CGC_name: nssp-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nssp
    Allele (16)
    RNASeq_FPKM (74)
    Ortholog: WBGene00040878 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      CSP26.g594 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP32.g17568 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP40.g21096 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-D1007.18 Caenorhabditis nigoni From_analysis: WormBase-Compara
      FL83_14724 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001256 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10304000 Caenorhabditis inopinata From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in mechanosensory neurons and neurons based on tiling array; single-cell RNA-seq; and RNA-seq studies. Is affected by several genes including nuo-6; atfs-1; and mter-4 based on tiling array; RNA-seq; and microarray studies. Is affected by Sirolimus; antimycin; and Colistin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: D1007.18
    Corresponding_CDS_history: D1007.18:wp157
    Corresponding_transcript: D1007.18.1
    Other_sequence: CSC01847_1
      FD516409.1
    Associated_feature: WBsf649104
      WBsf983443
      WBsf219282
  Experimental_info: RNAi_result: WBRNAi00081104 Inferred_automatically: RNAi_primary
      WBRNAi00109734 Inferred_automatically: RNAi_primary
      WBRNAi00109687 Inferred_automatically: RNAi_primary
      WBRNAi00094211 Inferred_automatically: RNAi_primary
      WBRNAi00003260 Inferred_automatically: RNAi_primary
      WBRNAi00109640 Inferred_automatically: RNAi_primary
      WBRNAi00109781 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015540
      Expr1147305
      Expr2002002
      Expr2020226
    Drives_construct: WBCnstr00023564
    Construct_product: WBCnstr00023564
    Microarray_results (15)
    Expression_cluster (82)
  Map_info: Map: I Position: -1.0426
    Positive: Positive_clone: D1007 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene