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WormBase Tree Display for Gene: WBGene00042812

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Name Class

WBGene00042812SMapS_parentSequencecb25.NA_220
IdentityVersion1
NameSequence_nameCBG24775
Molecular_nameCBG24775
CBG24775.1
CBP13595
Other_nameCBG_24775Accession_evidenceNDBHE601114
Public_nameCBG24775
DB_infoDatabaseNDBlocus_tagCBG_24775
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000220.9411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
22.722From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
26.477From_analysisRNASeq.briggsae.WBls:0000002.control_mean
35.7678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
29.2449From_analysisRNASeq.briggsae.WBls:0000002.control_median
32.0786From_analysisRNASeq.briggsae.WBls:0000002.control_mean
48.8835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000332.4855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
42.4752From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
52.4648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
37.4788From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
40.8097From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000439.8077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
41.8307From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
43.8538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
28.9078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
41.6046From_analysisRNASeq.briggsae.WBls:0000004.control_mean
42.9863From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
52.4673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.05667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
24.4896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.73425From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.76017From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.6929From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.61263From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003516.4944From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.5398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
14.9621From_analysisRNASeq.briggsae.WBls:0000038.control_median
15.8745From_analysisRNASeq.briggsae.WBls:0000038.control_mean
16.3844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
29.3562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.21745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004118.49From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
40.5677From_analysisRNASeq.briggsae.WBls:0000041.control_mean
46.1828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
46.4018From_analysisRNASeq.briggsae.WBls:0000041.control_median
46.6208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
50.9772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
25.6212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
31.9343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
36.6377From_analysisRNASeq.briggsae.WBls:0000041.control_mean
39.0586From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006311.1491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
17.8839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
20.3401From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.3704From_analysisRNASeq.briggsae.WBls:0000063.control_mean
20.744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
31.735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
20.5039From_analysisRNASeq.briggsae.WBls:0000063.control_mean
20.542From_analysisRNASeq.briggsae.WBls:0000063.control_median
21.1712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010120.715From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.1363From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
21.9466From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.392From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (26)
ParalogWBGene00026753Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034057Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: TM2 domain. Is an ortholog of C. elegans C02F5.13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG24775
Corresponding_CDS_historyCBG24775:bp194
Corresponding_transcriptCBG24775.1
Other_sequence (30)
Experimental_infoExpr_patternExpr1054037
Microarray_resultsGPL8303_CB6_WBGene00042812_A
GPL8303_CB6_WBGene00042812_C
GPL14143_CBG24775_227-286_0.944_1_C
GPL14143_CBG24775_302-361_0.915_12_B
GPL14143_CBG24775_348-407_0.940_3_A
MethodGene