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WormBase Tree Display for Gene: WBGene00040591

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Name Class

WBGene00040591SMapS_parentSequencecb25.fpc4292a
IdentityVersion2
NameCGC_nameCbr-dhp-1From_analysisInferred_from_orthology
Sequence_nameCBG21922
Molecular_nameCBG21922
CBG21922.1
CBP05205
Other_nameCBG_21922Accession_evidenceNDBHE600952
Public_nameCbr-dhp-1
DB_infoDatabaseNDBlocus_tagCBG_21922
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-dhp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdhp
AlleleWBVar00032767
WBVar00130742
WBVar00032772
WBVar00130743
WBVar00130744
RNASeq_FPKMWBls:000000228.7075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.9049From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
31.6145From_analysisRNASeq.briggsae.WBls:0000002.control_mean
35.231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
16.083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
27.7316From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.8062From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.813121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.12546From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.43779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.84292From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.27784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000415.1342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
15.336From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.5378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
14.6454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
16.7143From_analysisRNASeq.briggsae.WBls:0000004.control_mean
17.9695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
20.2847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002719.5366From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.28819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
46.0103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.31125From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.7639From_analysisRNASeq.briggsae.WBls:0000027.control_median
12.2166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
17.7066From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003512.2557From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.9501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
23.5151From_analysisRNASeq.briggsae.WBls:0000038.control_mean
24.3634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
24.9326From_analysisRNASeq.briggsae.WBls:0000038.control_median
25.5019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
32.2449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041176.02From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
23.7693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
27.7216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
53.0639From_analysisRNASeq.briggsae.WBls:0000041.control_median
76.4793From_analysisRNASeq.briggsae.WBls:0000041.control_mean
78.4062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
136.243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
63.9763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
71.1913From_analysisRNASeq.briggsae.WBls:0000041.control_median
84.3561From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006328.605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
33.3158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
34.2036From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
36.0573From_analysisRNASeq.briggsae.WBls:0000063.control_mean
36.6563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
47.5057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
22.8311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
33.7597From_analysisRNASeq.briggsae.WBls:0000063.control_median
33.8529From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010128.605From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.1319From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
24.9326From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.6408From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138740
00138741
00138742
Ortholog (29)
ParalogWBGene00026309Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035379Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds. Predicted to be located in cytoplasm. Is an ortholog of C. elegans dhp-1. In C. elegans, dhp-1 is involved in pyrimidine nucleobase catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG21922
Corresponding_CDS_historyCBG21922:bp194
Corresponding_transcriptCBG21922.1
Other_sequence (12)
Experimental_infoExpr_patternExpr1053046
Microarray_resultsGPL8303_CB6_WBGene00040591_A
GPL8303_CB6_WBGene00040591_C
GPL8303_CB6_WBGene00040591_D
GPL8303_CB6_WBGene00040591_E
GPL14143_CBG21922_1079-1138_0.775_24_C
GPL14143_CBG21922_1154-1213_0.788_13_B
GPL14143_CBG21922_1360-1419_0.691_76_A
MethodGene