WormBase Tree Display for Gene: WBGene00038152

WBGene00038152 SMap: S_parent: Sequence: cb25.fpc4122
  Identity: Version: 1
    Name: Sequence_name: CBG18809
      Molecular_name: CBG18809
        CBG18809.1
        CBP33206
      Other_name: CBG_18809 Accession_evidence: NDB HE601380
      Public_name: CBG18809
    DB_info: Database: NDB locus_tag CBG_18809
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:07 WBPerson1971 Event: Imported: Initial conversion from brigace
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 0.259073 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.329126 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.347726 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.380579 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.339002 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.358179 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.368632 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.050793 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.205694 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.360594 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.137129 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.487048 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.678804 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.870559 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.528821 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.556435 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.571461 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.602865 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 0.056297 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0.064415 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.069468 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.082639 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.118724 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0.441687 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0.466551 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        0.30275 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        0.382013 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
      WBls:0000027 0.049193 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.093425 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.231083 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.076193 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.095867 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.103193 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.028349 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.054242 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.217533 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.289246 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.380824 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.693569 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.009077 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.020221 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.039129 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.058037 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        13.4665 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        53.7787 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        18.1021 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        22.0868 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        36.1462 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        42.5088 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 14.7587 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        15.5583 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        15.8346 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        16.7075 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        17.4327 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        24.3046 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        15.5588 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        15.6965 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        6.18926 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.231083 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.01659 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.35416 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.11721 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (64)
    Paralog: WBGene00038153 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00030234 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033374 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033750 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034137 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034138 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037512 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00270402 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Lectin C-type domain; C-type lectin-like; C-type lectin-like/link domain superfamily; and C-type lectin fold. Is an ortholog of C. elegans clec-73 and clec-79. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG18809
    Corresponding_CDS_history: CBG18809:bp194
    Corresponding_transcript: CBG18809.1
    Other_sequence: JI166918.1
      CR03505
      CRC09288_1
      CBC13877_1
  Experimental_info: Expr_pattern: Expr1054124
    Microarray_results: GPL8303_CB6_WBGene00038152_A
      GPL14143_CBG18809_1154-1213_0.912_6_A
    Expression_cluster: WBPaper00058955:heatshock_upregulated_CBG
  Method: Gene