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WormBase Tree Display for Gene: WBGene00034303

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Name Class

WBGene00034303SMapS_parentSequencecb25.fpc3052b
IdentityVersion2
NameCGC_nameCbr-elt-6From_analysisInferred_from_orthology
Sequence_nameCBG13549
Molecular_nameCBG13549
CBG13549.1
CBP09366
Other_nameCBG_13549Accession_evidenceNDBHE600980
Public_nameCbr-elt-6
DB_infoDatabaseNDBlocus_tagCBG_13549
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-elt-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classelt
RNASeq_FPKMWBls:00000026.18476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.77189From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.95964From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.92228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.07066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.47832From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.4874From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000313.6765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
14.2345From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
14.7925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
11.9196From_analysisRNASeq.briggsae.WBls:0000003.control_mean
7.28984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000449.8802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
54.8493From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
59.8183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
50.7681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
52.0945From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
54.1648From_analysisRNASeq.briggsae.WBls:0000004.control_mean
58.2627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.899693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.8668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.20649From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.32433From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.85394From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.36859From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.50139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003513.2764From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.7854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.37913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.26132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.71536From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.84846From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.43561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.01472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.15206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.29838From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.44469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.91394From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.04429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.74449From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.06787From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.38808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.36341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.243317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.786695From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.01272From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.21242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.46502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.869871From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.11257From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.28575From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.1261From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.18476From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.5969From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.56765From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00132558
00132559
00132560
00132561
00132562
Ortholog (29)
ParalogWBGene00034302Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00029417Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032529Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036945Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039143Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans elt-6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG13549
Corresponding_CDS_historyCBG13549:bp194
Corresponding_transcriptCBG13549.1
Other_sequenceJI171952.1
Acan_isotig08607
CJC00785_1
CRC04851_1
Dviv_isotig16067
FC546465.1
CR10848
JI461031.1
Experimental_infoExpr_patternExpr1061703
Microarray_resultsGPL8303_CB6_WBGene00034303_A
GPL8303_CB6_WBGene00034303_B
GPL14143_CBG13549_875-934_0.921_8_C
GPL14143_CBG13549_976-1035_0.903_14_B
GPL14143_CBG13549_1107-1166_0.853_37_A
MethodGene