WormBase Tree Display for Gene: WBGene00034302

WBGene00034302 SMap: S_parent: Sequence: cb25.fpc3052b
  Identity: Version: 2
    Name: CGC_name: Cbr-egl-18 From_analysis: Inferred_from_orthology
      Sequence_name: CBG13548
      Molecular_name: CBG13548
        CBG13548.1
        CBP36440
      Other_name: CBG_13548 Accession_evidence: NDB HE600980
      Public_name: Cbr-egl-18
    DB_info: Database: NDB locus_tag CBG_13548
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:03 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-egl-18
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: egl
    RNASeq_FPKM: WBls:0000002 32.8461 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        39.0784 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        39.2993 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        45.0898 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        42.1945 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        43.9427 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        58.5357 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 329.526 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        329.664 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        329.801 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        338.293 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        355.553 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 241.348 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        241.792 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        242.235 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        253.934 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        258.433 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        266.699 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        287.95 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 12.3667 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        26.5972 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.96176 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        7.54127 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        11.6804 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        13.23 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        15.8196 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 33.0281 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.508 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        12.8931 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        13.9248 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        14.9565 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        16.8848 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        5.29777 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 15.7871 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        57.7477 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        68.2634 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        70.3839 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        72.5045 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        74.436 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        19.3466 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        27.7261 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        46.3439 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        47.9948 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 17.0708 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        19.4106 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        21.741 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        22.0217 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        22.1807 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        19.2824 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        21.8813 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        30.3407 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 26.5972 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        64.035 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        30.7255 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        83.4979 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00132553
      00132554
      00132555
      00132556
      00132557
    Ortholog (22)
    Paralog: WBGene00034303 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00029417 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032529 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036945 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039143 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans egl-18. In C. elegans, egl-18 is involved in cell fate specification; membrane fusion; and nematode larval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG13548
    Corresponding_CDS_history: CBG13548:bp194
    Corresponding_transcript: CBG13548.1
    Other_sequence: CRC03801_1
  Experimental_info: Expr_pattern: Expr1068621
    Microarray_results: GPL8303_CB6_WBGene00034302_A
      GPL8303_CB6_WBGene00034302_B
      GPL8303_CB6_WBGene00034302_C
      GPL8303_CB6_WBGene00034302_D
      GPL8303_CB6_WBGene00034302_E
      GPL14143_CBG13548_704-763_0.915_6_C
      GPL14143_CBG13548_817-876_0.888_21_B
      GPL14143_CBG13548_1104-1163_0.799_78_A
  Method: Gene