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WormBase Tree Display for Gene: WBGene00034298

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Name Class

WBGene00034298SMapS_parentSequencecb25.fpc3052b
IdentityVersion1
NameSequence_nameCBG13544
Molecular_nameCBG13544
CBG13544.1
CBP17824
Other_nameCBG_13544Accession_evidenceNDBHE600980
Public_nameCBG13544
DB_infoDatabaseNDBlocus_tagCBG_13544
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00015507
RNASeq_FPKMWBls:000000218.2777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
22.1442From_analysisRNASeq.briggsae.WBls:0000002.control_mean
23.3729From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
23.3407From_analysisRNASeq.briggsae.WBls:0000002.control_mean
24.0774From_analysisRNASeq.briggsae.WBls:0000002.control_median
26.93From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000352.7094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
54.7121From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
56.7147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
57.8801From_analysisRNASeq.briggsae.WBls:0000003.control_mean
64.2163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000431.5759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
33.5896From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
35.6032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
31.8378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
33.195From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
33.3816From_analysisRNASeq.briggsae.WBls:0000004.control_mean
34.696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.871714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
22.2889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.81892From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.99318From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.3329From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.0539From_analysisRNASeq.briggsae.WBls:0000027.control_median
22.3519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003522.864From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003818.7739From_analysisRNASeq.briggsae.WBls:0000038.control_mean
18.9426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
19.7214From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.5002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
28.5354From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.11726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004137.3716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
37.391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
38.183From_analysisRNASeq.briggsae.WBls:0000041.control_median
38.7514From_analysisRNASeq.briggsae.WBls:0000041.control_mean
38.9751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
41.2681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
40.1216From_analysisRNASeq.briggsae.WBls:0000041.control_median
41.5419From_analysisRNASeq.briggsae.WBls:0000041.control_mean
47.108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
47.1374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006316.4512From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.0647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
20.2108From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
20.6361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
21.3443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
17.8259From_analysisRNASeq.briggsae.WBls:0000063.control_mean
20.4235From_analysisRNASeq.briggsae.WBls:0000063.control_median
24.6996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010120.951From_analysisRNASeq.briggsae.total_over_all_stages.control_median
23.4995From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
23.1185From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.6752From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132542
Ortholog (18)
ParalogWBGene00027015Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029944Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035639Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036613Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037807Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans T07A9.10.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG13544
Corresponding_CDS_historyCBG13544:bp194
CBG13544:bp255
Corresponding_transcriptCBG13544.1
Other_sequenceCBC04611_1
Experimental_infoExpr_patternExpr1055704
Microarray_resultsGPL8303_CB6_WBGene00034298_A
GPL8303_CB6_WBGene00034298_B
GPL14143_CBG13544_1189-1248_0.897_17_C
GPL14143_CBG13544_1352-1411_0.903_11_B
GPL14143_CBG13544_1410-1469_0.945_2_A
MethodGene