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WormBase Tree Display for Gene: WBGene00033913

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Name Class

WBGene00033913SMapS_parentSequencecb25.fpc2969
IdentityVersion2
NameCGC_nameCbr-pdl-1From_analysisInferred_from_orthology
Sequence_nameCBG13085
Molecular_nameCBG13085
CBG13085.1
CBP03193
Other_nameCBG_13085Accession_evidenceNDBHE601401
Public_nameCbr-pdl-1
DB_infoDatabaseNDBlocus_tagCBG_13085
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-pdl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpdl
RNASeq_FPKMWBls:00000026.98249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.93268From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.96058From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.85498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.87184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.91747From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.47154From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.273126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.83531From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.3975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
3.28987From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.19899From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000413.8471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
17.3594From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
20.8717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
16.0005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
16.3503From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
18.2229From_analysisRNASeq.briggsae.WBls:0000004.control_mean
24.0447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.14207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.69497From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
19.5105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.44918From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.3728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.53389From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.43009From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.0368From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.2898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
18.1811From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.25258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.44325From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.63392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.08935From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000410.699791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.04706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.19303From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.97598From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.81805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.71072From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.95592From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.08245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.7492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.695485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.57227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.98987From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.38149From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.73832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.91149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.85387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.92187From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.29355From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001016.25258From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.36125From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.80821From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.76318From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132081
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to be involved in sensory perception of light stimulus. Is an ortholog of C. elegans pdl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG13085
Corresponding_CDS_historyCBG13085:bp194
Corresponding_transcriptCBG13085.1
Other_sequence (26)
Experimental_infoExpr_patternExpr1064041
Microarray_resultsGPL8303_CB6_WBGene00033913_A
GPL8303_CB6_WBGene00033913_B
GPL14143_CBG13085_31-90_0.900_11_B
GPL14143_CBG13085_74-133_0.939_2_C
GPL14143_CBG13085_196-255_0.940_1_A
MethodGene