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WormBase Tree Display for Gene: WBGene00033471

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Name Class

WBGene00033471SMapS_parentSequencecb25.fpc2888a2
IdentityVersion2
NameCGC_nameCbr-ceh-6From_analysisInferred_from_orthology
Sequence_nameCBG12531
Molecular_nameCBG12531
CBG12531.1
CBP45199
Other_nameCBG_12531Accession_evidenceNDBHE600940
Public_nameCbr-ceh-6
DB_infoDatabaseNDBlocus_tagCBG_12531
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ceh-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classceh
Allele (5)
RNASeq_FPKMWBls:00000023.12715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.61949From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.84688From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.88443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.05From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.47711From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.48702From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000032.79384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.3337From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.87357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.44568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.70436From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000418.8447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
20.7159From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
22.587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
16.7416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
20.1193From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
20.139From_analysisRNASeq.briggsae.WBls:0000004.control_mean
22.4024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.390805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.4363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.04251From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.62321From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.7541From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.08383From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.46569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.76388From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.838573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.38093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.41471From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.44849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.45991From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.17163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.222436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.273515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.374999From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.476482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.11065From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.47015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.33233From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.66371From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.18817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.35153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.234759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.507321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.575366From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.631405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.632522From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.21376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.603386From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.642474From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.692235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.79384From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.82274From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.08857From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.71885From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131599
00131600
00131601
Ortholog (30)
ParalogWBGene00034846Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036542Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans ceh-6. In C. elegans, ceh-6 is involved in transdifferentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG12531
Corresponding_CDS_historyCBG12531:bp194
CBG12531:bp255
Corresponding_transcriptCBG12531.1
Other_sequenceCRC06041_1
PPC15352_1
CBC00981_1
JI174934.1
Tcir_isotig27799
Acan_isotig09977
MA01978
JO468346.1
Oden_isotig19268
Experimental_infoExpr_patternExpr1063948
Microarray_resultsGPL8303_CB6_WBGene00033471_A
GPL8303_CB6_WBGene00033471_B
GPL14143_CBG12531_847-906_0.908_7_C
GPL14143_CBG12531_955-1014_0.745_103_A
GPL14143_CBG12531_1056-1115_0.899_9_B
MethodGene