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WormBase Tree Display for Gene: WBGene00033364

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Name Class

WBGene00033364SMapS_parentSequencecb25.fpc2887d2
IdentityVersion1
NameSequence_nameCBG12411
Molecular_nameCBG12411
CBG12411.1
CBP43298
Other_nameCBG_12411Accession_evidenceNDBHE600913
Public_nameCBG12411
DB_infoDatabaseNDBlocus_tagCBG_12411
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.15662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.28029From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.47512From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.98844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.8723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.21845From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.32441From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.027229From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.054458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.018153From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:00000240.023714From_analysisRNASeq.briggsae.WBls:0000024.control_median
0.029051From_analysisRNASeq.briggsae.WBls:0000024.control_mean
0.047429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
0.068775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
0.070321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
0.123348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
0.433883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:00000270From_analysisRNASeq.briggsae.WBls:0000027.control_mean
RNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.008225From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.032901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.096452From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.207526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.244041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
10.1987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.23002From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.21657From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000410.038635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.060699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.085794From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.11089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
17.3256From_analysisRNASeq.briggsae.WBls:0000041.control_mean
69.0922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
34.6016From_analysisRNASeq.briggsae.WBls:0000041.control_median
39.5887From_analysisRNASeq.briggsae.WBls:0000041.control_mean
73.8681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
94.3619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006312.5355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
13.6275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.2845From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
15.9956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
17.3747From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.4305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.456From_analysisRNASeq.briggsae.WBls:0000063.control_median
15.6283From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.89627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.096452From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.99085From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.082613From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.20437From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00009455Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00143564Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00059997Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
Csp5_scaffold_04216.g32378Caenorhabditis sinicaFrom_analysisWormBase-Compara
Cnig_chr_I.g2054Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g2154Caenorhabditis nigoniFrom_analysisWormBase-Compara
WBGene00107363Pristionchus pacificusFrom_analysisWormBase-Compara
ParalogWBGene00025308Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00026650Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Inner centromere protein; Inner centromere protein, ARK binding region; and Inner centromere protein, ARK-binding domain. Is an ortholog of C. elegans phip-1. In C. elegans, phip-1 is involved in positive regulation of axon regeneration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG12411
Corresponding_CDS_historyCBG12411:bp194
CBG12411:bp255
Corresponding_transcriptCBG12411.1
Other_sequenceCR08947
CRC07927_1
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00033364_A
MethodGene