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WormBase Tree Display for Gene: WBGene00033362

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Name Class

WBGene00033362SMapS_parentSequencecb25.fpc2887d2
IdentityVersion2
NameCGC_nameCbr-fasn-1From_analysisInferred_from_orthology
Sequence_nameCBG12408
Molecular_nameCBG12408
CBG12408.1
CBP42824
Other_nameCBG_12408Accession_evidenceNDBHE600913
Public_nameCbr-fasn-1
DB_infoDatabaseNDBlocus_tagCBG_12408
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-fasn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfasn
AlleleWBVar00008989
WBVar00008994
RNASeq_FPKMWBls:000000228.9237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
32.1756From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
32.5343From_analysisRNASeq.briggsae.WBls:0000002.control_mean
36.5036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
19.1822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
29.1963From_analysisRNASeq.briggsae.WBls:0000002.control_mean
30.5497From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000313.6825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
19.6374From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
25.5922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
14.646From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
17.9736From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004139.353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
140.613From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
141.872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
136.762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
141.014From_analysisRNASeq.briggsae.WBls:0000004.control_mean
141.432From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
145.653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002726.3278From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
41.7671From_analysisRNASeq.briggsae.WBls:0000027.control_mean
89.2346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.73884From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.6598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
20.9938From_analysisRNASeq.briggsae.WBls:0000027.control_median
35.2403From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035163.974From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038119.472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
29.7095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
62.8211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
64.4973From_analysisRNASeq.briggsae.WBls:0000038.control_median
66.1735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
69.544From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004127.2018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
27.9606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
29.0536From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.1491From_analysisRNASeq.briggsae.WBls:0000041.control_median
30.3376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
30.7145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
24.1733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
24.3966From_analysisRNASeq.briggsae.WBls:0000041.control_mean
27.5812From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006336.583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
38.3242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
38.5285From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
39.7494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
40.0979From_analysisRNASeq.briggsae.WBls:0000063.control_mean
47.3043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
22.0711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
37.0934From_analysisRNASeq.briggsae.WBls:0000063.control_mean
38.4263From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010138.3242From_analysisRNASeq.briggsae.total_over_all_stages.control_median
54.7598From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
36.5433From_analysisRNASeq.briggsae.total_over_all_stages.control_median
55.6212From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131471
00131472
00131473
00131474
00131475
Ortholog (31)
ParalogWBGene00026574Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035105Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable acyltransferase activity; oxidoreductase activity; and phosphopantetheine binding activity. Predicted to be involved in biosynthetic process. Is an ortholog of C. elegans fasn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG12408
Corresponding_CDS_historyCBG12408:bp194
CBG12408:bp255
Corresponding_transcriptCBG12408.1
Other_sequence (89)
Experimental_infoExpr_patternExpr1050034
Microarray_resultsGPL8303_CB6_WBGene00033362_A
GPL8303_CB6_WBGene00033362_B
GPL14143_CBG12408_7642-7701_0.742_323_C
GPL14143_CBG12408_7853-7912_0.902_10_B
GPL14143_CBG12408_8016-8075_0.935_3_A
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_downregulated
MethodGene