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WormBase Tree Display for Gene: WBGene00031539

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Name Class

WBGene00031539SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-mut-7From_analysisInferred_from_orthology
Sequence_nameCBG10058
Molecular_nameCBG10058
CBG10058.1
CBP46637
Other_nameCBG_10058Accession_evidenceNDBHE601459
Public_nameCbr-mut-7
DB_infoDatabaseNDBlocus_tagCBG_10058
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mut-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmut
AlleleWBVar00115514
WBVar00115515
WBVar00115516
RNASeq_FPKMWBls:000000213.962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.5435From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.1233From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.8643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.7039From_analysisRNASeq.briggsae.WBls:0000002.control_median
15.7381From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.5825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000319.6684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
20.6272From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
21.586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
18.8929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
20.0491From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.0289From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.1495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.90836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.0689From_analysisRNASeq.briggsae.WBls:0000004.control_mean
10.9765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
9.47867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.83162From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.481697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
13.0541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.87545From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.13708From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.28175From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.02482From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.68805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.66541From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.0161From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.2434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
15.7298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.71403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.78883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.36901From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004111.9931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
21.297From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.3909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
23.2628From_analysisRNASeq.briggsae.WBls:0000041.control_median
24.1346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
26.6693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
18.4375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
20.8749From_analysisRNASeq.briggsae.WBls:0000041.control_mean
21.6242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
22.0075From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006313.3578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.4046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
15.8918From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.5044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
17.7356From_analysisRNASeq.briggsae.WBls:0000063.control_mean
26.5196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.2024From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
17.5319From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010113.0541From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.2251From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
13.2059From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.5672From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129799
00129800
00129801
Contained_in_operonCBOPA0327
Ortholog (25)
ParalogWBGene00031541Caenorhabditis briggsaeFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionPredicted to enable 3'-5' exonuclease activity and nucleic acid binding activity. Predicted to be involved in nucleobase-containing compound metabolic process. Is an ortholog of C. elegans mut-7. In C. elegans, mut-7 is involved in olfactory learning and regulatory ncRNA-mediated post-transcriptional gene silencing.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG10058
Corresponding_CDS_historyCBG10058:bp194
CBG10058:bp255
Corresponding_transcriptCBG10058.1
Other_sequenceCR03715
CBC14770_1
CRC08288_1
Experimental_infoExpr_patternExpr1050822
Microarray_resultsGPL8303_CB6_WBGene00031539_A
GPL8303_CB6_WBGene00031539_B
GPL14143_CBG10058_1521-1580_0.849_93_B
GPL14143_CBG10058_1732-1791_0.864_77_C
GPL14143_CBG10058_2334-2393_0.930_3_A
MethodGene