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WormBase Tree Display for Gene: WBGene00029417

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Name Class

WBGene00029417SMapS_parentSequencecb25.fpc0829
IdentityVersion4
NameCGC_nameCbr-elt-3From_analysisInferred_from_orthology
Sequence_nameCBG07341
Molecular_nameCBG07341a
CBG07341a.1
CBP48594
CBG07341b
CBP38667
CBG07341b.1
Other_nameCBG_07341Accession_evidenceNDBHE601041
CBG_28094
Public_nameCbr-elt-3
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-elt-3
314 Nov 2017 10:39:33WBPerson4025EventAcquires_mergeWBGene00089508
414 Nov 2017 10:44:15WBPerson4025EventAcquires_mergeWBGene00089508
Acquires_mergeWBGene00089508
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classelt
RNASeq_FPKMWBls:000000212.7736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.7763From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.458From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.0973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
10.0723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
14.3503From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.6158From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000036.78292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
7.07545From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.36798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.14076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
5.43055From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000451.9714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
53.9962From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
56.021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
56.1795From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
57.5054From_analysisRNASeq.briggsae.WBls:0000004.control_mean
61.5322From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
61.8228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.4453From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.2411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.26018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
8.98219From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.8432From_analysisRNASeq.briggsae.WBls:0000027.control_median
12.9779From_analysisRNASeq.briggsae.WBls:0000027.control_mean
24.965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003533.8689From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003819.1282From_analysisRNASeq.briggsae.WBls:0000038.control_mean
21.34From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.6447From_analysisRNASeq.briggsae.WBls:0000038.control_median
21.9494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
23.4679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
9.7554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000414.68315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.23859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.60857From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.83083From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.97855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.42305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.05183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.79911From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.41948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.8327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.5176From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.55804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
7.53068From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.66657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.02593From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.59863From_analysisRNASeq.briggsae.WBls:0000063.control_median
9.56759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.4453From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.5389From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.139From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.8784From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127573
00127574
00127575
00127576
00127577
Ortholog (24)
ParalogWBGene00032529Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034302Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034303Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036945Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039143Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans elt-3. In C. elegans, elt-3 is involved in several processes, including determination of adult lifespan; positive regulation of transcription by RNA polymerase II; and response to stress.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG07341a
CBG07341b
Corresponding_CDS_historyCBG07341:bp194
CBG07341:bp255
CBG07341:bp262
Corresponding_transcriptCBG07341a.1
CBG07341b.1
Other_sequence (11)
Experimental_infoExpr_patternExpr1068902
Expr1070158
Microarray_resultsGPL8303_CB6_WBGene00029417_A
GPL8303_CB6_WBGene00029417_B
GPL8303_CB6_WBGene00029417_C
GPL8303_CB6_WBGene00029417_D
GPL8303_CB6_WBGene00029417_E
GPL14143_CBG07341_678-737_0.850_6_A
GPL14143_CBG07341_809-868_0.854_4_B
GPL14143_CBG07341_827-886_0.872_2_C
GPL14143_CBG28094_75-134_0.919_1_A
MethodGene