WormBase Tree Display for Gene: WBGene00026800

WBGene00026800 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 3
    Name: CGC_name: Cbr-calu-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG04054
      Molecular_name: CBG04054
        CBG04054.1
        CBP46047
      Other_name: CBG_04054 Accession_evidence: NDB HE600906
      Public_name: Cbr-calu-2
    DB_info: Database: NDB locus_tag CBG_04054
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 24 Jul 2008 11:56:30 WBPerson1847 Event: Acquires_merge: WBGene00026801
        3 09 Mar 2012 14:28:09 WBPerson2970 Name_change: CGC_name: Cbr-calu-2
      Acquires_merge: WBGene00026801
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: calu
    Allele: WBVar00108975
      WBVar00108976
      WBVar00108977
      WBVar00108978
    RNASeq_FPKM: WBls:0000002 15.3684 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        16.8063 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        27.8205 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        51.2868 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        27.7129 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        30.5203 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        38.6195 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 32.6661 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        46.974 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        61.2819 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        40.3776 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        44.7752 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 28.5222 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        31.5055 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        34.4888 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        26.3269 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        31.4623 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        32.8247 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        35.1487 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 14.6151 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        14.6185 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        16.2861 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        17.9537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        18.8377 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        19.1973 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        20.2059 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        31.7497 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        33.6363 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        16.052 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        32.1123 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        32.1362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
      WBls:0000027 0.457404 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        18.5801 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.16604 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        7.06785 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        11.4226 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        6.79432 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        8.15654 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 14.5363 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 10.0013 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        12.1262 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        13.5718 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        14.2511 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        27.2397 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        2.79526 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 29.7809 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        31.6779 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        31.8837 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        32.0895 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        32.8626 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        37.9022 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        34.9958 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        37.7027 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        39.4615 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        55.3042 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 11.6649 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        12.0626 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        12.3099 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        20.4261 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        8.41333 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        8.98256 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        11.8638 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        12.329 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        12.4247 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 16.8063 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        20.8369 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        19.5031 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        23.5837 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00125157
    Ortholog: WBGene00017240 Caenorhabditis elegans From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00060603 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00145798 Caenorhabditis brenneri From_analysis: OMA
            WormBase-Compara
      WBGene00190613 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00121291 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g10345 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g2018 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3786 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11171 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8655 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8069 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11004 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8029 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_01766.g16723 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-calu-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00236.g7664 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18688 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001055 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11762 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9431 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10297000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00223446 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g1236 Caenorhabditis elegans From_analysis: WormBase-Compara
      CSP40.g19838 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17062 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      WBGene00237867 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00283751 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259913 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292304 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296343 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00025461 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027019 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035026 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Is an ortholog of C. elegans calu-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG04054
    Corresponding_CDS_history: CBG04054:bp194
      CBG04054:bp255
    Corresponding_transcript: CBG04054.1
    Other_sequence: BU087523.1
      ACC14467_1
      NBC00399_1
      Tcir_isotig14369
      TDC01494_1
      Acan_isotig02193
      Oden_isotig13085
      EW743719.1
      CB037377.1
      CRC05342_1
      BU089318.1
      EW744673.1
      CR00971
      Oden_isotig13086
      NB07154
      NBC07821_1
      Dviv_isotig35660
      NAC01777_1
  Experimental_info: Expr_pattern: Expr1068909
    Microarray_results: GPL8303_CB6_WBGene00026800_A
      GPL8303_CB6_WBGene00026801_A
      GPL14143_CBG04054_406-465_0.919_10_B
      GPL14143_CBG04054_580-639_0.930_7_C
      GPL14143_CBG04054_728-787_0.961_1_A
  Method: Gene