WormBase Tree Display for Gene: WBGene00026788

WBGene00026788 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 2
    Name: CGC_name: Cbr-ngp-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG04042
      Molecular_name: CBG04042
        CBG04042.1
        CBP43968
      Other_name: CBG_04042 Accession_evidence: NDB HE600906
      Public_name: Cbr-ngp-1
    DB_info: Database: NDB locus_tag CBG_04042
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-ngp-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ngp
    Allele: WBVar00108961
      WBVar00108960
    RNASeq_FPKM: WBls:0000002 111.431 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        66.0033 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        82.0401 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        86.4915 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        43.5825 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        74.0217 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        75.7642 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 52.7752 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        56.0936 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        59.412 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        43.5561 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        51.9144 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 66.3471 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        68.1412 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        69.9353 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        63.4108 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        65.6448 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        66.8561 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        68.9423 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 17.8485 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        35.582 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.92766 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        83.9697 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        148.242 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        50.9091 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        63.747 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 80.7168 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 100.271 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        107.218 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        166.647 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        22.0188 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        93.3233 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        97.3018 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 66.7507 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        68.0122 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        68.034 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        68.0557 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        69.944 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        76.9574 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        215.499 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        72.5066 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        93.6496 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        98.1541 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 101.737 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        53.6995 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        54.6143 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        60.0657 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        61.9195 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        66.4072 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        60.7412 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        61.4167 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        65.5754 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 68.0557 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        76.1052 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        68.034 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        79.2367 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00125137
      00125138
    Ortholog (34)
    Paralog: WBGene00024033 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032800 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039687 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040822 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity. Predicted to be located in nucleolus. Is an ortholog of C. elegans ngp-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG04042
    Corresponding_CDS_history: CBG04042:bp194
      CBG04042:bp255
    Corresponding_transcript: CBG04042.1
    Other_sequence (84)
  Experimental_info: Expr_pattern: Expr1062023
    Microarray_results: GPL8303_CB6_WBGene00026788_A
      GPL8303_CB6_WBGene00026788_B
      GPL14143_CBG04042_1603-1662_0.918_13_C
      GPL14143_CBG04042_1706-1765_0.925_9_B
      GPL14143_CBG04042_1993-2052_0.931_4_A
    Expression_cluster: WBPaper00051425:CB_L1_vs_embryo_upregulated
  Method: Gene