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WormBase Tree Display for Gene: WBGene00026755

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Name Class

WBGene00026755SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-eif-3.HFrom_analysisInferred_from_orthology
Sequence_nameCBG04003
Molecular_nameCBG04003
CBG04003.1
CBP14961
Other_nameCBG_04003Accession_evidenceNDBHE600906
Public_nameCbr-eif-3.H
DB_infoDatabaseNDBlocus_tagCBG_04003
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-eif-3.H
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classeif
RNASeq_FPKMWBls:0000002112.202From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
113.007From_analysisRNASeq.briggsae.WBls:0000002.control_mean
134.674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
92.1438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
119.433From_analysisRNASeq.briggsae.WBls:0000002.control_mean
123.438From_analysisRNASeq.briggsae.WBls:0000002.control_median
138.713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003136.082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
140.281From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
144.481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
143.277From_analysisRNASeq.briggsae.WBls:0000003.control_mean
149.267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004116.474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
117.507From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
118.54From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
104.647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
113.501From_analysisRNASeq.briggsae.WBls:0000004.control_mean
133.527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
94.316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002726.8762From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
40.1859From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.34687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
85.3346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
52.7918From_analysisRNASeq.briggsae.WBls:0000027.control_mean
56.1054From_analysisRNASeq.briggsae.WBls:0000027.control_median
90.6096From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035125.496From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038101.914From_analysisRNASeq.briggsae.WBls:0000038.control_median
103.982From_analysisRNASeq.briggsae.WBls:0000038.control_mean
112.563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
126.632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
85.4663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
91.2659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041145.262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
163.655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
169.394From_analysisRNASeq.briggsae.WBls:0000041.control_mean
171.975From_analysisRNASeq.briggsae.WBls:0000041.control_median
180.296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
188.363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
150.789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
167.869From_analysisRNASeq.briggsae.WBls:0000041.control_mean
171.253From_analysisRNASeq.briggsae.WBls:0000041.control_median
178.85From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063116.453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
129.934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
80.9554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
81.1951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
85.1469From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
98.7369From_analysisRNASeq.briggsae.WBls:0000063.control_mean
92.0644From_analysisRNASeq.briggsae.WBls:0000063.control_median
98.7777From_analysisRNASeq.briggsae.WBls:0000063.control_mean
98.9819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101107.317From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
116.453From_analysisRNASeq.briggsae.total_over_all_stages.control_median
111.892From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
116.464From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00125094
00125095
00125096
00125097
00125098
Ortholog (29)
ParalogWBGene00036473Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039027Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042178Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metallopeptidase activity and translation initiation factor activity. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Is an ortholog of C. elegans eif-3.H.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG04003
Corresponding_CDS_historyCBG04003:bp194
CBG04003:bp239
Corresponding_transcriptCBG04003.1
Other_sequence (48)
Experimental_infoExpr_patternExpr1061859
Microarray_resultsGPL8303_CB6_WBGene00026755_A
GPL14143_CBG04003_276-335_0.872_43_C
GPL14143_CBG04003_635-694_0.931_7_B
GPL14143_CBG04003_730-789_0.934_5_A
MethodGene