WormBase Tree Display for Gene: WBGene00026739

WBGene00026739 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 2
    Name: CGC_name: Cbr-ubxn-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03986
      Molecular_name: CBG03986
        CBG03986.1
        CBP06617
      Other_name: CBG_03986 Accession_evidence: NDB HE600906
      Public_name: Cbr-ubxn-1
    DB_info: Database: NDB locus_tag CBG_03986
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-ubxn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ubxn
    RNASeq_FPKM: WBls:0000002 121.749 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        57.378 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        84.4032 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        87.8434 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        88.7449 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        89.1542 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        93.0867 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 162.297 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        165.536 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        168.774 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        123.637 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        151.569 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 68.0333 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        68.5204 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        69.0075 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        59.0021 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        69.1064 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        69.7277 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        83.4892 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 10.034 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        19.3331 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.1227 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        8.64616 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        12.3621 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        13.9896 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        19.3465 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 18.4144 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 22.3149 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        26.3475 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        27.4803 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        28.0397 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        29.7319 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        31.527 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 195.957 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        199.684 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        200.778 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        200.809 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        200.84 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        201.163 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        201.001 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        207.279 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        215.441 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        229.492 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 57.0908 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        58.288 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        60.6869 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        63.6183 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        63.731 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        78.2946 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        62.209 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        69.4223 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        98.4423 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 57.378 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        72.6561 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        62.209 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        81.5281 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (33)
    Paralog: WBGene00023702 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037617 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Ubiquitin-like domain superfamily; UBA-like superfamily; and UBX domain. Is an ortholog of C. elegans ubxn-1. In C. elegans, ubxn-1 is involved in masculinization of hermaphroditic germ-line; positive regulation of protein catabolic process; and spermatogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG03986
    Corresponding_CDS_history: CBG03986:bp194
    Corresponding_transcript: CBG03986.1
    Other_sequence (13)
  Experimental_info: Expr_pattern: Expr1057148
    Microarray_results: GPL8303_CB6_WBGene00026739_A
      GPL8303_CB6_WBGene00026739_B
      GPL8303_CB6_WBGene00026739_C
      GPL14143_CBG03986_231-290_0.852_26_C
      GPL14143_CBG03986_490-549_0.922_7_B
      GPL14143_CBG03986_671-730_0.954_1_A
  Method: Gene