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WormBase Tree Display for Gene: WBGene00026738

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Name Class

WBGene00026738SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-tipn-1From_analysisInferred_from_orthology
Sequence_nameCBG03985
Molecular_nameCBG03985
CBG03985.1
CBP14958
Other_nameCBG_03985Accession_evidenceNDBHE600906
Public_nameCbr-tipn-1
DB_infoDatabaseNDBlocus_tagCBG_03985
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
204 Apr 2017 17:04:05WBPerson2970Name_changeCGC_nameCbr-tipn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtipn
RNASeq_FPKMWBls:000000233.6758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
43.7909From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
44.611From_analysisRNASeq.briggsae.WBls:0000002.control_mean
56.3662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
48.1809From_analysisRNASeq.briggsae.WBls:0000002.control_mean
50.0785From_analysisRNASeq.briggsae.WBls:0000002.control_median
58.8908From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003190.754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
238.37From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
285.986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
145.442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
207.394From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004100.497From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
106.31From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
94.6838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
102.864From_analysisRNASeq.briggsae.WBls:0000004.control_mean
103.695From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
123.828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
85.8052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.67038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.72482From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
21.371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.2554From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.2389From_analysisRNASeq.briggsae.WBls:0000027.control_median
10.8798From_analysisRNASeq.briggsae.WBls:0000027.control_mean
18.753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003514.4031From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.73From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
18.562From_analysisRNASeq.briggsae.WBls:0000038.control_mean
18.6597From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.5895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.5149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
34.4135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041102.279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
18.1409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
76.6891From_analysisRNASeq.briggsae.WBls:0000041.control_mean
89.1248From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
93.1684From_analysisRNASeq.briggsae.WBls:0000041.control_median
97.2119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
25.0023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
34.6416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
61.0667From_analysisRNASeq.briggsae.WBls:0000041.control_mean
61.8832From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063112.722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
35.2136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
39.8641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
43.2627From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
47.7037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
55.7532From_analysisRNASeq.briggsae.WBls:0000063.control_mean
45.4832From_analysisRNASeq.briggsae.WBls:0000063.control_median
48.1543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
54.4867From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010135.2136From_analysisRNASeq.briggsae.total_over_all_stages.control_median
55.1046From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
37.6418From_analysisRNASeq.briggsae.total_over_all_stages.control_median
59.0065From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00125073
00125074
00125075
00125076
Ortholog (20)
Structured_descriptionAutomated_descriptionPredicted to be involved in DNA damage response; DNA replication checkpoint signaling; and replication fork processing. Predicted to be located in nucleus. Is an ortholog of C. elegans tipn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03985
Corresponding_CDS_historyCBG03985:bp194
Corresponding_transcriptCBG03985.1
Other_sequenceCJC11327_1
Experimental_infoExpr_patternExpr1054691
Microarray_resultsGPL8303_CB6_WBGene00026738_A
GPL8303_CB6_WBGene00026738_B
GPL14143_CBG03985_20-79_0.892_10_C
GPL14143_CBG03985_162-221_0.910_6_A
GPL14143_CBG03985_296-355_0.765_42_B
MethodGene