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WormBase Tree Display for Gene: WBGene00026716

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Name Class

WBGene00026716SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-let-502From_analysisInferred_from_orthology
Sequence_nameCBG03960
Molecular_nameCBG03960
CBG03960.1
CBP01010
Other_nameCBG_03960Accession_evidenceNDBHE600906
Public_nameCbr-let-502
DB_infoDatabaseNDBlocus_tagCBG_03960
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-let-502
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlet
AlleleWBVar00108871
WBVar00108872
WBVar00108873
WBVar00108874
WBVar00108868
WBVar00108869
WBVar00108870
RNASeq_FPKMWBls:000000239.9374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
51.8785From_analysisRNASeq.briggsae.WBls:0000002.control_mean
52.147From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
63.5511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
53.8921From_analysisRNASeq.briggsae.WBls:0000002.control_mean
56.04From_analysisRNASeq.briggsae.WBls:0000002.control_median
59.933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003125.374From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
165.104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
85.6448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
106.38From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
119.043From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000465.552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
67.2819From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
69.0117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
64.2545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
69.0275From_analysisRNASeq.briggsae.WBls:0000004.control_mean
69.4301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
76.889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.898744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
23.4297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.77107From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.69984From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.7807From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.3971From_analysisRNASeq.briggsae.WBls:0000027.control_median
22.0232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003527.1539From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003829.8107From_analysisRNASeq.briggsae.WBls:0000038.control_mean
34.8827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
36.189From_analysisRNASeq.briggsae.WBls:0000038.control_median
37.4953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
38.3717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.4932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004149.5048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
78.864From_analysisRNASeq.briggsae.WBls:0000041.control_mean
83.485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
86.078From_analysisRNASeq.briggsae.WBls:0000041.control_median
88.671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
93.7951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
62.1263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
70.6242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
74.7011From_analysisRNASeq.briggsae.WBls:0000041.control_mean
77.0546From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006339.7981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
41.3861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
42.518From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
43.8298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
48.6908From_analysisRNASeq.briggsae.WBls:0000063.control_mean
75.9219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
43.1739From_analysisRNASeq.briggsae.WBls:0000063.control_median
46.531From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
48.3308From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010139.9374From_analysisRNASeq.briggsae.total_over_all_stages.control_median
46.9917From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
45.1804From_analysisRNASeq.briggsae.total_over_all_stages.control_median
51.0777From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00125048
00125049
00125050
00125051
Ortholog (31)
ParalogWBGene00038207Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein serine/threonine kinase activity. Is an ortholog of C. elegans let-502. In C. elegans, let-502 is involved in several processes, including embryonic body morphogenesis; nematode pharyngeal gland morphogenesis; and nematode pharynx development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03960
Corresponding_CDS_historyCBG03960:bp194
CBG03960:bp255
Corresponding_transcriptCBG03960.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1062264
Expr1065789
Microarray_resultsGPL8303_CB6_WBGene00026716_A
GPL8303_CB6_WBGene00026716_B
GPL8303_CB6_WBGene00026717_A
GPL8303_CB6_WBGene00026717_B
GPL14143_CBG03960_476-535_0.798_97_B
GPL14143_CBG03960_738-797_0.805_83_C
GPL14143_CBG03960_1121-1180_0.755_198_A
GPL14143_CBG03961_76-135_0.732_144_C
GPL14143_CBG03961_149-208_0.902_18_B
GPL14143_CBG03961_571-630_0.919_10_A
MethodGene