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WormBase Tree Display for Gene: WBGene00026715

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Name Class

WBGene00026715SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-viln-1From_analysisInferred_from_orthology
Sequence_nameCBG03958
Molecular_nameCBG03958
CBG03958.1
CBP42328
Other_nameCBG_03958Accession_evidenceNDBHE600906
Public_nameCbr-viln-1
DB_infoDatabaseNDBlocus_tagCBG_03958
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-viln-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classviln
RNASeq_FPKMWBls:000000214.2233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
17.556From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.8156From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
19.6291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
18.7729From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.2223From_analysisRNASeq.briggsae.WBls:0000002.control_median
22.4237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000316.7324From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
18.0903From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
19.4482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
16.3671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
17.5159From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000430.2651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
30.4582From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
30.6513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
29.2096From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.5514From_analysisRNASeq.briggsae.WBls:0000004.control_mean
32.7143From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
34.9168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.881208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
19.0193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.09703From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.33251From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.8138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.45541From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.70283From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000355.80606From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.38209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.49821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.21272From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.92722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.01563From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004149.6838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
52.0083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
52.4441From_analysisRNASeq.briggsae.WBls:0000041.control_mean
52.4875From_analysisRNASeq.briggsae.WBls:0000041.control_median
52.9668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
55.1177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
54.0423From_analysisRNASeq.briggsae.WBls:0000041.control_median
55.8677From_analysisRNASeq.briggsae.WBls:0000041.control_mean
60.7988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
64.6308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006314.5512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
17.9373From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
19.9From_analysisRNASeq.briggsae.WBls:0000063.control_mean
30.8796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
18.1276From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.3851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
19.6475From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010116.7324From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.4822From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
18.1276From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.5591From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00125045
00125046
00125047
Ortholog (29)
ParalogWBGene00023962Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038533Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable actin filament binding activity. Predicted to be involved in cytoskeleton organization. Is an ortholog of C. elegans viln-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03958
Corresponding_CDS_historyCBG03958:bp194
CBG03958:bp255
Corresponding_transcriptCBG03958.1
Other_sequenceJI165544.1
CBC05247_1
Experimental_infoExpr_patternExpr1056036
Microarray_resultsGPL8303_CB6_WBGene00026715_A
GPL8303_CB6_WBGene00026715_B
GPL8303_CB6_WBGene00026715_C
GPL14143_CBG03958_2302-2361_0.943_3_C
GPL14143_CBG03958_2444-2503_0.895_24_B
GPL14143_CBG03958_2547-2606_0.959_1_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene