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WormBase Tree Display for Gene: WBGene00026702

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Name Class

WBGene00026702SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-rga-6From_analysisInferred_from_orthology
Sequence_nameCBG03944
Molecular_nameCBG03944
CBG03944.1
CBP43207
Other_nameCBG_03944Accession_evidenceNDBHE600906
Public_nameCbr-rga-6
DB_infoDatabaseNDBlocus_tagCBG_03944
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
221 Jul 2009 15:22:41WBPerson9133Name_changeCGC_nameCbr-rga-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrga
RNASeq_FPKMWBls:00000022.34612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.49606From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.57102From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.87087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.63016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.3358From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.42109From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000033.17069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
3.61767From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.06464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
3.82355From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.23533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.76126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
3.85802From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
3.95477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
3.78356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.05338From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.35678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
4.41053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.713149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.41193From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.57527From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.60072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.33285From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.50877From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.6056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.75397From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.09495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.20158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.31702From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.43247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.72814From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.18357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.395263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.477412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.518942From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.560473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.83864From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.92142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.24095From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.4581From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.21989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.17411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.38035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.42533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.4616From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.6287From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.67652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.19971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.27733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.44346From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.57014From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.43247From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.35076From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.02078From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.60172From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00125022
Ortholog (27)
Structured_descriptionAutomated_descriptionPredicted to be involved in signal transduction. Is an ortholog of C. elegans rga-6. In C. elegans, rga-6 is involved in defense response to fungus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03944
Corresponding_CDS_historyCBG03944:bp194
CBG03944:bp255
Corresponding_transcriptCBG03944.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1059871
Microarray_resultsGPL8303_CB6_WBGene00026702_A
GPL8303_CB6_WBGene00026702_B
GPL8303_CB6_WBGene00026702_C
GPL8303_CB6_WBGene00026702_D
GPL8303_CB6_WBGene00026702_E
GPL14143_CBG03944_2474-2533_0.902_15_C
GPL14143_CBG03944_2666-2725_0.919_9_A
GPL14143_CBG03944_2714-2773_0.938_2_B
MethodGene