WormBase Tree Display for Gene: WBGene00026697

WBGene00026697 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 2
    Name: CGC_name: Cbr-rege-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03935
      Molecular_name: CBG03935
        CBG03935.1
        CBP06605
      Other_name: CBG_03935 Accession_evidence: NDB HE600906
      Public_name: Cbr-rege-1
    DB_info: Database: NDB locus_tag CBG_03935
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 14 Oct 2016 15:27:13 WBPerson2970 Name_change: CGC_name: Cbr-rege-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rege
    Allele: WBVar00136097
      WBVar00136098
      WBVar00136099
    RNASeq_FPKM: WBls:0000002 17.2575 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        21.7317 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        24.2504 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        5.79039 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        17.3273 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        17.5368 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        19.6343 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.151362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.874031 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        1.5967 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.968517 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        1.15749 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 6.19836 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        6.35734 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        6.51632 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        6.63118 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        7.03166 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        7.44461 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        8.36782 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 16.4371 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        35.9852 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3.79259 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        9.53367 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        22.7594 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        24.0845 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        47.0264 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 35.7101 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.2674 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        27.5249 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        29.3827 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        42.7823 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        56.1876 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        6.29365 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 4.76954 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        5.93512 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        6.03903 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        6.14294 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        6.69066 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        9.91504 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        10.629 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        5.77084 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        7.19375 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 14.3273 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        15.5361 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        15.6626 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        16.3976 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        17.2258 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        24.2054 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        16.0301 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        17.3701 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        18.0915 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 14.3273 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        18.1236 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        11.4482 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        17.0589 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (26)
    Paralog: WBGene00039170 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041066 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: UBA-like domain; Rege-1, UBA-like domain; Zc3h12a-like Ribonuclease NYN domain; Ribonuclease Zc3h12a-like, NYN domain; Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain; and Endoribonuclease Regnase 1/ZC3H12, C-terminal domain. Is an ortholog of C. elegans rege-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG03935
    Corresponding_CDS_history: CBG03935:bp194
    Corresponding_transcript: CBG03935.1
    Other_sequence (18)
  Experimental_info: Expr_pattern: Expr1064974
    Microarray_results: GPL8303_CB6_WBGene00026697_A
      GPL14143_CBG03935_913-972_0.858_37_C
      GPL14143_CBG03935_1018-1077_0.778_94_B
      GPL14143_CBG03935_1229-1288_0.861_36_A
  Method: Gene