WormBase Tree Display for Gene: WBGene00026679

WBGene00026679 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 2
    Name: CGC_name: Cbr-homt-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03917
      Molecular_name: CBG03917
        CBG03917.1
        CBP21366
      Other_name: CBG_03917 Accession_evidence: NDB HE600906
      Public_name: Cbr-homt-1
    DB_info: Database: NDB locus_tag CBG_03917
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 27 Apr 2012 17:09:23 WBPerson2970 Name_change: CGC_name: Cbr-homt-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: homt
    RNASeq_FPKM: WBls:0000002 22.3858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        29.6976 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        31.4666 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        35.2404 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        31.5694 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        33.3535 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        37.1847 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 119.162 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        67.5082 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        93.3351 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        78.1173 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        88.2625 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 59.5782 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        62.8663 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        66.1544 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        60.6675 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        66.1514 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        68.1062 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        76.2509 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 12.021 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.32462 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        30.0328 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.70568 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        13.9607 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        14.8197 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        23.2158 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 21.2829 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 19.2174 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        19.882 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        20.3808 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        21.5442 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        30.4449 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        8.3217 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 31.6198 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        53.4682 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        55.2241 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        58.4047 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        61.5853 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        65.4435 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        52.0665 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        55.8919 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        69.4122 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 21.0353 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        21.5736 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        21.9757 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        22.5059 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        27.4253 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        50.0362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        22.2408 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        28.6701 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        34.8938 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 30.0328 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        34.7009 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        32.2522 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        39.6379 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00125002
      00125003
    Ortholog (30)
    Paralog: WBGene00037018 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable methyltransferase activity. Is an ortholog of C. elegans homt-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG03917
    Corresponding_CDS_history: CBG03917:bp194
    Corresponding_transcript: CBG03917.1
    Other_sequence (18)
  Experimental_info: Expr_pattern: Expr1062439
    Microarray_results: GPL8303_CB6_WBGene00026679_A
      GPL14143_CBG03917_373-432_0.725_91_C
      GPL14143_CBG03917_504-563_0.916_9_A
      GPL14143_CBG03917_583-642_0.934_3_B
  Method: Gene