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WormBase Tree Display for Gene: WBGene00026668

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Name Class

WBGene00026668SMapS_parentSequencecb25.fpc0071c2
IdentityVersion3
NameCGC_nameCbr-rpl-7From_analysisInferred_from_orthology
Sequence_nameCBG03905
Molecular_nameCBG03905
CBG03905.1
CBP35110
Other_nameCBG_03905Accession_evidenceNDBHE600906
Public_nameCbr-rpl-7
DB_infoDatabaseNDBlocus_tagCBG_03905
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rpl-7
313 Nov 2007 14:01:54WBPerson2970EventAcquires_mergeWBGene00000355
Acquires_mergeWBGene00000355
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
RNASeq_FPKMWBls:00000022070.32From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2167.78From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2242.26From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2488.67From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1704.19From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2107.74From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2119.05From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003448.821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
487.97From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
527.118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
500.784From_analysisRNASeq.briggsae.WBls:0000003.control_mean
526.412From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041005.49From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
942.549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
974.019From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1005.82From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
983.423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
985.727From_analysisRNASeq.briggsae.WBls:0000004.control_mean
991.355From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271297.28From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1406.96From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1857.73From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
627.145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1536.25From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1632.34From_analysisRNASeq.briggsae.WBls:0000027.control_median
2253.16From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352470.51From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381976.32From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2280.41From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2323.5From_analysisRNASeq.briggsae.WBls:0000038.control_median
2336.71From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2366.58From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2723.53From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000411560.4From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1698.76From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1708.69From_analysisRNASeq.briggsae.WBls:0000041.control_median
1718.63From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1734.68From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1960.92From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1448.11From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1709.12From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1867.92From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631581.09From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1618.77From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1621.82From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1642.65From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1908.19From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3076.62From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1632.23From_analysisRNASeq.briggsae.WBls:0000063.control_median
1928.64From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2030.88From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011857.73From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1878From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1711.41From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1770.35From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00124985
00124986
00124987
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of ribosome. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of C. elegans rpl-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03905
Corresponding_CDS_historyCBG03905:bp194
Corresponding_transcriptCBG03905.1
Other_sequence (367)
Experimental_infoExpr_patternExpr1056219
Microarray_resultsGPL8303_CB6_WBGene00026668_A
GPL8303_CB6_WBGene00026668_B
GPL14143_CBG03905_162-221_0.913_8_C
GPL14143_CBG03905_255-314_0.932_4_B
GPL14143_CBG03905_682-741_0.970_1_A
Expression_clusterWBPaper00051425:CB_L4_vs_embryo_upregulated
MethodGene