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WormBase Tree Display for Gene: WBGene00026658

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Name Class

WBGene00026658SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-abt-2From_analysisInferred_from_orthology
Sequence_nameCBG03891
Molecular_nameCBG03891
CBG03891.1
CBP43114
Other_nameCBG_03891Accession_evidenceNDBHE600906
Public_nameCbr-abt-2
DB_infoDatabaseNDBlocus_tagCBG_03891
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-abt-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classabt
RNASeq_FPKMWBls:00000023.56155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.32678From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.69973From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.71905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.36597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.08658From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.13064From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.199328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.324525From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.449722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.470029From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.761038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.792503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.00185From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.21119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.04201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.05718From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.10124From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.40332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.385032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
12.2907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.83451From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.83675From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.30008From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.81897From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.76564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000356.25646From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.875249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.36102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.54284From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.27844From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.19587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.7392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000413.15468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.36565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.39167From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.41769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.39494From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.64175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.22566From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.51093From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.03362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.45218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000633.60404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.62788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.64402From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.82471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.24851From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.54192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.21712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
3.63595From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.90995From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001013.64402From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.74696From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.61596From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.52From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00124966
00124967
00124968
00124969
00124970
Ortholog (48)
ParalogWBGene00024527Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031527Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039310Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans abt-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03891
Corresponding_CDS_historyCBG03891:bp194
CBG03891:bp255
Corresponding_transcriptCBG03891.1
Other_sequence (34)
Experimental_infoExpr_patternExpr1067351
Microarray_resultsGPL8303_CB6_WBGene00026658_A
GPL8303_CB6_WBGene00026658_B
GPL14143_CBG03891_6519-6578_0.906_5_C
GPL14143_CBG03891_6627-6686_0.702_453_B
GPL14143_CBG03891_6914-6973_0.927_2_A
MethodGene