WormBase Tree Display for Gene: WBGene00026655

WBGene00026655 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 7
    Name: CGC_name: Cbr-slc-17.6 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03886
      Molecular_name: CBG03886
        CBG03886.1
        CBP44006
      Other_name: CBG_03886 Accession_evidence: NDB HE600906
        Cbr-lgc-51 From_analysis: Inferred_from_orthology
      Public_name: Cbr-slc-17.6
    DB_info: Database: NDB locus_tag CBG_03886
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 21 Apr 2008 17:10:50 WBPerson2970 Name_change: CGC_name: Cbr-lgc-51
        3 24 Jul 2008 11:56:30 WBPerson1847 Event: Acquires_merge: WBGene00026654
        4 27 Jun 2014 16:03:40 WBPerson2970 Name_change: CGC_name: Cbr-slc-17.6
                Other_name: Cbr-lgc-51
        5 31 Aug 2016 10:30:13 WBPerson4025 Event: Split_into: WBGene00270414
        6 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        7 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Cbr-slc-17.6
        8 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        9 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cbr-slc-17.6
      Acquires_merge: WBGene00026654
      Split_into: WBGene00270414
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: slc
    RNASeq_FPKM: WBls:0000002 1.86048 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        3.90072 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        4.98145 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        9.18315 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        2.12285 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        3.01179 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        4.2668 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.143371 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.286742 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.203078 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.322491 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.242414 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.579005 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.915597 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.833758 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.935356 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.938931 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        1.13649 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.330327 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.58756 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        4.43235 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.36337 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        1.78977 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.39642 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.822243 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.02321 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        1.33195 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        2.04324 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        2.75452 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        3.61111 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        9.33478 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 4.20176 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        4.57858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        4.73096 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        4.81141 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.88334 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        5.58194 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        5.04085 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.05615 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        5.22895 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        5.77051 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 10.6002 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        11.2425 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        12.6629 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        16.7166 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        7.86303 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        8.36961 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        10.0212 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3.91463 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        9.48491 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 3.96209 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        4.49157 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        3.3516 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        4.0269 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00124957
      00124958
    Ortholog (34)
    Paralog (56)
    Structured_description: Automated_description: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Is an ortholog of C. elegans slc-17.6. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG03886
    Corresponding_CDS_history: CBG03886:bp194
      CBG03886:bp255
    Corresponding_transcript: CBG03886.1
  Experimental_info: Expr_pattern: Expr1060284
    Microarray_results: GPL8303_CB6_WBGene00026654_A
      GPL14143_CBG03886_2108-2167_0.851_39_B
      GPL14143_CBG03886_2307-2366_0.894_21_A
      GPL14143_CBG03886_2687-2746_0.940_1_C
  Remark: [190208 pad] The CGC name Cbr-slc-17.6 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbr-slc-17.6 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene