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WormBase Tree Display for Gene: WBGene00026649

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Name Class

WBGene00026649SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-tpxl-1From_analysisInferred_from_orthology
Sequence_nameCBG03879
Molecular_nameCBG03879
CBG03879.1
CBP39180
Other_nameCBG_03879Accession_evidenceNDBHE600906
Public_nameCbr-tpxl-1
DB_infoDatabaseNDBlocus_tagCBG_03879
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-tpxl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtpxl
RNASeq_FPKMWBls:000000243.6241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
54.9249From_analysisRNASeq.briggsae.WBls:0000002.control_mean
58.4953From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
62.6554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
60.5754From_analysisRNASeq.briggsae.WBls:0000002.control_median
63.7415From_analysisRNASeq.briggsae.WBls:0000002.control_mean
90.191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003132.368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
148.993From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
165.619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
147.569From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
148.519From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000475.8528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
76.5329From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
77.2129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
79.676From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
81.1355From_analysisRNASeq.briggsae.WBls:0000004.control_mean
81.9735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
90.9622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002712.4175From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.4298From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.5663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.30544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.1023From_analysisRNASeq.briggsae.WBls:0000027.control_median
14.7691From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.7871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003516.2205From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.8704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.1314From_analysisRNASeq.briggsae.WBls:0000038.control_mean
21.2544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
21.3815From_analysisRNASeq.briggsae.WBls:0000038.control_median
21.5087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
25.8922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041108.709From_analysisRNASeq.briggsae.WBls:0000041.control_mean
116.705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
117.021From_analysisRNASeq.briggsae.WBls:0000041.control_median
117.338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
123.267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
77.5263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
101.534From_analysisRNASeq.briggsae.WBls:0000041.control_mean
106.881From_analysisRNASeq.briggsae.WBls:0000041.control_median
77.3106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
97.0574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063116.175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
51.7794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
53.3732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
56.2435From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
57.719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
67.058From_analysisRNASeq.briggsae.WBls:0000063.control_mean
56.9813From_analysisRNASeq.briggsae.WBls:0000063.control_median
67.7179From_analysisRNASeq.briggsae.WBls:0000063.control_mean
71.0176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010151.7794From_analysisRNASeq.briggsae.total_over_all_stages.control_median
55.8842From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
58.1072From_analysisRNASeq.briggsae.total_over_all_stages.control_median
62.4259From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (21)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans tpxl-1. In C. elegans, tpxl-1 is involved in astral microtubule organization and mitotic spindle assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03879
Corresponding_CDS_historyCBG03879:bp194
CBG03879:bp255
Corresponding_transcriptCBG03879.1
Other_sequenceCBC08748_1
CR01972
CRC06364_1
Experimental_infoExpr_patternExpr1057926
Microarray_resultsGPL8303_CB6_WBGene00026649_A
GPL8303_CB6_WBGene00026649_B
GPL14143_CBG03879_724-783_0.864_35_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene