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WormBase Tree Display for Gene: WBGene00026641

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Name Class

WBGene00026641SMapS_parentSequencecb25.fpc0071c2
IdentityVersion4
NameCGC_nameCbr-scpl-1From_analysisInferred_from_orthology
Sequence_nameCBG03870
Molecular_nameCBG03870a
CBG03870a.1
CBP40050
CBG03870b
CBP42674
CBG03870c
CBP44023
CBG03870b.1
CBG03870c.1
Other_nameCBG_03870Accession_evidenceNDBHE600906
CBG_03872
CBG_25232
Public_nameCbr-scpl-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-scpl-1
331 Aug 2016 10:29:43WBPerson4025EventAcquires_mergeWBGene00026642
431 Aug 2016 10:29:43WBPerson4025EventAcquires_mergeWBGene00086646
Acquires_mergeWBGene00026642
WBGene00086646
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classscpl
AlleleWBVar00017759
WBVar00108790
WBVar00108791
RNASeq_FPKMWBls:0000002145.639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
63.7417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
67.9088From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
92.4298From_analysisRNASeq.briggsae.WBls:0000002.control_mean
80.2339From_analysisRNASeq.briggsae.WBls:0000002.control_median
92.4621From_analysisRNASeq.briggsae.WBls:0000002.control_mean
92.559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000329.1796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
35.0149From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
40.8501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
39.1178From_analysisRNASeq.briggsae.WBls:0000003.control_mean
47.3237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000424.5374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.8469From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
29.1564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
24.7659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
25.1889From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
27.0653From_analysisRNASeq.briggsae.WBls:0000004.control_mean
31.6777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002718.9098From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
30.8432From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.90799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
67.7117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
116.037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
43.3107From_analysisRNASeq.briggsae.WBls:0000027.control_median
52.1416From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003565.3674From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038101.535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
17.0548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
63.8651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
67.5406From_analysisRNASeq.briggsae.WBls:0000038.control_mean
75.7862From_analysisRNASeq.briggsae.WBls:0000038.control_median
87.7073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004182.2918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
84.6739From_analysisRNASeq.briggsae.WBls:0000041.control_mean
84.9661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
85.2699From_analysisRNASeq.briggsae.WBls:0000041.control_median
85.5737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
85.864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
85.7188From_analysisRNASeq.briggsae.WBls:0000041.control_median
88.0106From_analysisRNASeq.briggsae.WBls:0000041.control_mean
93.0513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
96.3167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063130.487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
76.1547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
78.7336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
80.777From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
81.6844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
89.5673From_analysisRNASeq.briggsae.WBls:0000063.control_mean
69.3122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
79.7553From_analysisRNASeq.briggsae.WBls:0000063.control_median
86.1915From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010168.2133From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
76.1547From_analysisRNASeq.briggsae.total_over_all_stages.control_median
67.7478From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
72.7335From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00124940
Ortholog (30)
ParalogWBGene00031212Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033174Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033948Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatase activity. Is an ortholog of C. elegans scpl-1. In C. elegans, scpl-1 is involved in regulation of egg-laying behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03870a
CBG03870b
CBG03870c
Corresponding_CDS_historyCBG03870:bp194
CBG03870:bp255
Corresponding_transcriptCBG03870a.1
CBG03870b.1
CBG03870c.1
Other_sequence (33)
Experimental_infoExpr_patternExpr1068071
Microarray_resultsGPL8303_CB6_WBGene00026641_A
GPL8303_CB6_WBGene00026641_B
GPL8303_CB6_WBGene00026642_A
GPL14143_CBG03870_1176-1235_0.759_81_B
GPL14143_CBG03870_1232-1291_0.934_3_A
GPL14143_CBG03870_1407-1466_0.682_128_C
MethodGene