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WormBase Tree Display for Gene: WBGene00026625

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Name Class

WBGene00026625SMapS_parentSequencecb25.fpc0071c2
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classoct
RNASeq_FPKMWBls:00000020.623599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.00667From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.04294From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.49855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.285947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.815135From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.853692From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.141213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.220572From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.29993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.147048From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.430354From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.711819From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.993284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.41442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.670782From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.682465From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.833389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.123167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.219615From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.725534From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.83382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.02672From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.13921From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.38026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.46534From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.330596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.45547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.59546From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.69812From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.73546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.27094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.571367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.620934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.70606From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.791185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.19574From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.79949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.1497From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.42178From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.50822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.23947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.83492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.929136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.22664From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.2496From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.32086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.79868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.26047From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.28523From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.4296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.993284From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.404From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.96121From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.32868From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00124915
00124916
00124917
Ortholog (28)
Paralog (30)
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans oct-1. In C. elegans, oct-1 is involved in determination of adult lifespan and organic cation transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03850
Corresponding_CDS_historyCBG03850:bp194
Corresponding_transcriptCBG03850.1
Other_sequenceJI476195.1
ACC03891_1
JI461435.1
Experimental_infoExpr_patternExpr1054672
Microarray_resultsGPL8303_CB6_WBGene00026625_A
GPL8303_CB6_WBGene00026625_B
GPL14143_CBG03850_1379-1438_0.838_28_C
GPL14143_CBG03850_1410-1469_0.867_11_A
GPL14143_CBG03850_1532-1591_0.908_4_B
MethodGene