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WormBase Tree Display for Gene: WBGene00026623

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Name Class

WBGene00026623SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-nhr-69From_analysisInferred_from_orthology
Sequence_nameCBG03848
Molecular_nameCBG03848a
CBG03848a.1
CBP06574
CBG03848b
CBP42425
CBG03848b.1
Other_nameCBG_03848Accession_evidenceNDBHE600906
Public_nameCbr-nhr-69
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-69
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar00108787
RNASeq_FPKMWBls:000000216.0534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.4377From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.0525From_analysisRNASeq.briggsae.WBls:0000002.control_mean
37.6664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
17.7344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
18.0861From_analysisRNASeq.briggsae.WBls:0000002.control_median
22.473From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000319.0323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
19.7066From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
20.381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
19.8629From_analysisRNASeq.briggsae.WBls:0000003.control_mean
20.1754From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000423.5878From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
27.0681From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
30.5484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
27.066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
28.8969From_analysisRNASeq.briggsae.WBls:0000004.control_mean
30.4182From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
32.8642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.751316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.267From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.67585From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
45.3738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
15.8535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
16.1636From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.26468From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003511.7009From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.7633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
17.1388From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.4981From_analysisRNASeq.briggsae.WBls:0000038.control_mean
23.5144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.51768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
33.1971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004115.5061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.0312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
16.5084From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.6728From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.9856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.1681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
17.5769From_analysisRNASeq.briggsae.WBls:0000041.control_median
19.2804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
20.0573From_analysisRNASeq.briggsae.WBls:0000041.control_mean
34.3724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006312.3575From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
12.8831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
15.2From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.8419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
17.2055From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.7448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
12.8946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
14.0473From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.487From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010116.0534From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.0437From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
17.9513From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.3139From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00124907
00124908
00124909
00124910
Ortholog (29)
Paralog (30)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-69. In C. elegans, nhr-69 is involved in negative regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03848a
CBG03848b
Corresponding_CDS_historyCBG03848:bp194
Corresponding_transcriptCBG03848a.1
CBG03848b.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1054064
Microarray_resultsGPL8303_CB6_WBGene00026623_A
GPL8303_CB6_WBGene00026623_B
GPL14143_CBG03848_582-641_0.784_81_C
GPL14143_CBG03848_1006-1065_0.945_3_B
GPL14143_CBG03848_1082-1141_0.965_1_A
MethodGene