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WormBase Tree Display for Gene: WBGene00026603

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Name Class

WBGene00026603SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-tsp-7From_analysisInferred_from_orthology
Sequence_nameCBG03823
Molecular_nameCBG03823
CBG03823.1
CBP01112
Other_nameCBG_03823Accession_evidenceNDBHE600906
Public_nameCbr-tsp-7
DB_infoDatabaseNDBlocus_tagCBG_03823
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tsp-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtsp
AlleleWBVar00017699
WBVar00047634
WBVar00108772
RNASeq_FPKMWBls:000000212.0423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
15.8741From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.3101From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
18.2699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
14.0813From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.6762From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.70283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000033.61593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.67812From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.74031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
5.06505From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.83892From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000432.8255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
37.3531From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
41.8806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
29.1536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
29.6776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
33.1186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
33.3312From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002712.4839From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.56From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.77609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
8.11576From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.3379From_analysisRNASeq.briggsae.WBls:0000027.control_median
24.4623From_analysisRNASeq.briggsae.WBls:0000027.control_mean
60.3973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003523.9363From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.8001From_analysisRNASeq.briggsae.WBls:0000038.control_mean
15.1063From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.87027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
20.6358From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
23.1177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.57684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000411.3852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.70122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.94828From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.19535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.30734From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.94759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.6322From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.8418From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.06905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
4.75239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000632.545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.11418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.6451From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.81744From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.24058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.50829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.6857From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.85308From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.88872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010112.7045From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.11576From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.3955From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.4093From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00124890
Ortholog (29)
Paralog (17)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans tsp-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03823
Corresponding_CDS_historyCBG03823:bp194
Corresponding_transcriptCBG03823.1
Other_sequence (17)
Experimental_infoExpr_patternExpr1063558
Microarray_resultsGPL8303_CB6_WBGene00026603_A
GPL8303_CB6_WBGene00026603_B
GPL14143_CBG03823_226-285_0.564_55_C
GPL14143_CBG03823_459-518_0.874_6_A
GPL14143_CBG03823_641-700_0.946_1_B
MethodGene