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WormBase Tree Display for Gene: WBGene00026593

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Name Class

WBGene00026593SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-gfi-2From_analysisInferred_from_orthology
Sequence_nameCBG03811
Molecular_nameCBG03811
CBG03811.1
CBP01108
Other_nameCBG_03811Accession_evidenceNDBHE600906
Public_nameCbr-gfi-2
DB_infoDatabaseNDBlocus_tagCBG_03811
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-gfi-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgfi
RNASeq_FPKMWBls:000000225.6121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
48.2097From_analysisRNASeq.briggsae.WBls:0000002.control_mean
56.5014From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
62.5156From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
50.0364From_analysisRNASeq.briggsae.WBls:0000002.control_mean
55.5164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
56.0089From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003112.859From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
131.274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
94.4432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
104.079From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
109.932From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000466.1631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
66.5607From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
66.9583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
63.0782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
67.0419From_analysisRNASeq.briggsae.WBls:0000004.control_mean
67.2809From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
71.7292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002715.2343From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.3224From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
26.2861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.09425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.8043From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.4069From_analysisRNASeq.briggsae.WBls:0000027.control_mean
59.925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003554.4327From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.2263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
23.2746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
36.3313From_analysisRNASeq.briggsae.WBls:0000038.control_median
36.9618From_analysisRNASeq.briggsae.WBls:0000038.control_mean
49.3881From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
61.9584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041101.073From_analysisRNASeq.briggsae.WBls:0000041.control_median
102.747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
111.398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
62.6829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
94.0568From_analysisRNASeq.briggsae.WBls:0000041.control_mean
99.3995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
70.494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
76.0819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
87.1339From_analysisRNASeq.briggsae.WBls:0000041.control_mean
87.7407From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006315.0208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.4113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
15.8582From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
17.9644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
19.0709From_analysisRNASeq.briggsae.WBls:0000063.control_mean
31.0996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.9113From_analysisRNASeq.briggsae.WBls:0000063.control_median
23.3592From_analysisRNASeq.briggsae.WBls:0000063.control_mean
44.801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010143.563From_analysisRNASeq.briggsae.total_over_all_stages.control_median
47.736From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
52.5613From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
54.9745From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Contained_in_operonCBOPA0143
Ortholog (34)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Ankyrin repeat; Domain of unknown function DUF3447; Ankyrin repeats (3 copies); and Ankyrin repeat-containing domain superfamily. Is an ortholog of C. elegans gfi-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03811
Corresponding_CDS_historyCBG03811:bp194
CBG03811:bp255
Corresponding_transcriptCBG03811.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1054130
Microarray_resultsGPL8303_CB6_WBGene00026593_A
GPL14143_CBG03811_784-843_0.862_41_C
GPL14143_CBG03811_1073-1132_0.903_14_B
GPL14143_CBG03811_1309-1368_0.954_1_A
MethodGene