WormBase Tree Display for Gene: WBGene00026567

WBGene00026567 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 3
    Name: CGC_name: Cbr-alg-5 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03777
      Molecular_name: CBG03777
        CBG03777.1
        CBP42510
      Other_name: CBG_03777 Accession_evidence: NDB HE600906
        Cbr-hpo-24 From_analysis: Inferred_from_orthology
      Public_name: Cbr-alg-5
    DB_info: Database: NDB locus_tag CBG_03777
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 26 Apr 2011 13:45:33 WBPerson2970 Name_change: CGC_name: Cbr-hpo-24
        3 28 Feb 2017 08:21:43 WBPerson2970 Name_change: CGC_name: Cbr-alg-5
                Other_name: Cbr-hpo-24
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: alg
    RNASeq_FPKM: WBls:0000002 12.1012 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        14.2345 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        15.0004 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        15.6019 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        15.3012 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        18.2462 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        30.2813 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 28.5394 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        30.3036 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        32.0677 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        29.2055 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        29.9375 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 8.38137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        8.60057 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        8.81977 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        7.12153 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        7.90217 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        8.44039 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        9.97709 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 0.670803 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0.736923 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        0.822829 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.855154 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        0.905945 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.908735 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.935939 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        1.04729 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        1.30732 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0.591647 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        0.971107 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        1.0503 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
      WBls:0000027 0.189411 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.450788 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.978606 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.29562 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.07646 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        1.15949 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.70214 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 2.04616 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 2.50098 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        2.59713 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        3.50025 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        4.31978 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        4.40337 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        7.77764 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 36.1379 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        43.0585 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        43.3069 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        43.5553 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        49.1022 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        8.83556 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        14.3317 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        14.4236 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        28.7411 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        28.8845 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 19.6448 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        21.7486 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        21.9785 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        22.3731 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        24.1983 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        35.2467 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        22.1758 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        22.6308 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        23.9371 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 14.2048 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        8.81977 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        14.4609 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        9.40633 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00124836
      00124837
    Ortholog: WBGene00011945 Caenorhabditis elegans From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00164561 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00130222 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00079962 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144966 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g10270 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g14151 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7821 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13546 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26833 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8162 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9520 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00550.g12130 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10894 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03216.g29454 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_24264 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000663 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10058800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1949 Caenorhabditis elegans From_analysis: WormBase-Compara
      Cni-hpo-24 Caenorhabditis nigoni From_analysis: WormBase-Compara
      CSP21.g3557 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP40.g20225 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP39.g2537 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
    Paralog: WBGene00024219 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024628 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025275 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026507 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027952 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027953 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028684 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029416 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031001 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031445 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033098 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033283 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034952 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037276 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037399 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038215 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038650 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040168 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042016 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042457 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Is an ortholog of C. elegans alg-5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG03777
    Corresponding_CDS_history: CBG03777:bp255
    Corresponding_transcript: CBG03777.1
    Other_sequence: CR00905
      CRC10208_1
  Experimental_info: Expr_pattern: Expr1059640
    Microarray_results: GPL8303_CB6_WBGene00026567_A
      GPL8303_CB6_WBGene00026567_B
      GPL8303_CB6_WBGene00026567_C
      GPL14143_CBG03777_2468-2527_0.940_6_B
      GPL14143_CBG03777_2579-2638_0.964_1_A
      GPL14143_CBG03777_2669-2728_0.964_2_C
  Method: Gene