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WormBase Tree Display for Gene: WBGene00026230

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Name Class

WBGene00026230SMapS_parentSequencecb25.fpc0063
IdentityVersion2
NameCGC_nameCbr-lad-2From_analysisInferred_from_orthology
Sequence_nameCBG03355
Molecular_nameCBG03355
CBG03355.1
CBP46646
Other_nameCBG_03355Accession_evidenceNDBHE601244
Public_nameCbr-lad-2
DB_infoDatabaseNDBlocus_tagCBG_03355
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lad-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlad
AlleleWBVar00011729
WBVar00011734
RNASeq_FPKMWBls:00000022.96044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.3886From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.38252From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.79852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.96852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.67452From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.52902From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.05639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.1788From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.30122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.25151From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.39691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000049.28329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.62273From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.96217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.44613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.7504From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.8664From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.428348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.7738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.21576From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.47264From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.93294From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.01701From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.65012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.68581From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.708406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.39573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.85748From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.1283From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.86088From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.46491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.904762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.935249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.077From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.21874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.93614From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.68582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.25179From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.58736From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.28483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
4.49479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.45103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.15566From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.21335From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.28307From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.35083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.48002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.24485From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.31695From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.69079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.39573From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.85879From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.12263From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.23414From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (45)
Paralog (18)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Fibronectin type III; Immunoglobulin subtype; Fibronectin type III domain; Immunoglobulin-like domain superfamily; Immunoglobulin I-set; Immunoglobulin domain; Immunoglobulin subtype 2; Basigin-like; Immunoglobulin-like fold; and Fibronectin type III superfamily. Is an ortholog of C. elegans lad-2. In C. elegans, lad-2 is involved in anterior/posterior axon guidance; dorsal/ventral axon guidance; and regulation of axon guidance.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG03355
Corresponding_CDS_historyCBG03355:bp194
CBG03355:bp255
Corresponding_transcriptCBG03355.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1060453
Microarray_resultsGPL8303_CB6_WBGene00026230_A
GPL14143_CBG03355_756-815_0.796_81_C
GPL14143_CBG03355_1105-1164_0.804_71_B
GPL14143_CBG03355_1722-1781_0.787_91_A
MethodGene