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WormBase Tree Display for Gene: WBGene00023596

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Name Class

WBGene00023596SMapS_parentSequencecb25.fpc0003
IdentityVersion3
NameSequence_nameCBG00120
Molecular_nameCBG00120
CBG00120.1
CBP05659
Other_nameCBG_00120Accession_evidenceNDBHE601409
Public_nameCBG00120
DB_infoDatabaseNDBlocus_tagCBG_00120
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-myo-2
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002110.417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.64935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
63.1357From_analysisRNASeq.briggsae.WBls:0000002.control_mean
77.3409From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
41.1264From_analysisRNASeq.briggsae.WBls:0000002.control_median
48.5798From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.91191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.260926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.30318From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.34544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.1959From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.98134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000413.8986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.9984From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
14.0982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
14.6997From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
15.245From_analysisRNASeq.briggsae.WBls:0000004.control_mean
15.8978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
17.6308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024108.725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
124.312From_analysisRNASeq.briggsae.WBls:0000024.control_mean
128.737From_analysisRNASeq.briggsae.WBls:0000024.control_median
135.954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
140.947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
148.749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
16.3048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
200.816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
223.47From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
116.449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
135.555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
172.22From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
WBls:000002719.9814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
41.2807From_analysisRNASeq.briggsae.WBls:0000027.control_mean
47.794From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
56.0667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
183.03From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
51.9304From_analysisRNASeq.briggsae.WBls:0000027.control_median
76.718From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035151.559From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038100.546From_analysisRNASeq.briggsae.WBls:0000038.control_mean
101.692From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.8405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
147.591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
186.959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
55.7933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004112.7348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
21.635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
23.1935From_analysisRNASeq.briggsae.WBls:0000041.control_mean
25.3309From_analysisRNASeq.briggsae.WBls:0000041.control_median
29.0267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
29.3774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
19.2712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
21.4501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
21.5425From_analysisRNASeq.briggsae.WBls:0000041.control_median
22.2492From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006312.0572From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.2503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
15.2509From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.3285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
15.4564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
15.2897From_analysisRNASeq.briggsae.WBls:0000063.control_median
17.0436From_analysisRNASeq.briggsae.WBls:0000063.control_mean
41.9754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010119.9814From_analysisRNASeq.briggsae.total_over_all_stages.control_median
53.445From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
18.451From_analysisRNASeq.briggsae.total_over_all_stages.control_median
49.3093From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00121722
00121723
00121724
00121725
OrthologWBGene00002348Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00003514Caenorhabditis elegansPerson_evidenceWBPerson396
From_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00003515Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00003776Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00003777Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00006789Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00009730Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00012437Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00019064Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00051137Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00162863Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00120864Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CSP21.g5907Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16706Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17765Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g5611Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g12150Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15621Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12155Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_11753.g23408Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_16110.g25262Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g25065Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00076.g3494Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_03397Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024983Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11344Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0224100Caenorhabditis inopinataFrom_analysisWormBase-Compara
CSP29.g4416Caenorhabditis beceiFrom_analysisWormBase-Compara
CBOVI.g2777Caenorhabditis bovisFrom_analysisWormBase-Compara
chrX_pilon.g20271Caenorhabditis elegansFrom_analysisWormBase-Compara
CSP32.g11427Caenorhabditis sulstoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18784Caenorhabditis tropicalisFrom_analysisWormBase-Compara
WBGene00116910Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00255842Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291504Trichuris murisFrom_analysisWormBase-Compara
WBGene00296307Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00025170Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025248Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026664Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030079Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032487Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032961Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033338Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034297Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034825Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035002Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035391Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036446Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036991Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038520Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038900Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039075Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039234Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040055Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040581Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040884Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041777Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00088526Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans unc-54 and members of the C. elegans nmy and myo gene classes including nmy-3 and myo-6. In C. elegans, myo-1 is involved in muscle contraction and nematode pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG00120
Corresponding_CDS_historyCBG00120:bp194
CBG00120:bp255
Corresponding_transcriptCBG00120.1
Other_sequenceJI214396.1
ES411192.1
FC555682.1
HBC18180_1
EX542544.1
CJC01115_1
Oden_isotig19090
FC551024.1
EX537181.1
BMC08338_1
EX550450.1
EX547349.1
AIC00182_1
FD516227.1
ACC27590_1
CJC04528_1
EX544647.1
Dviv_isotig34311
EX546906.1
CSC01371_1
EH005322.1
Hbac_isotig04616
CBC05011_1
EX564522.1
EX539746.1
FC553574.1
EX545901.1
JO473407.1
JI464273.1
EX550289.1
Acan_isotig06496
AI130622.1
OVC02029_1
FC555541.1
EX548793.1
EY473751.1
Oden_isotig24449
ACC05731_1
FC555634.1
FC551169.1
EX539333.1
EX544669.1
Acan_isotig13147
EY466824.1
EX540148.1
FC551568.1
Experimental_infoExpr_patternExpr1051032
Drives_constructWBCnstr00021498
WBCnstr00021632
Construct_productWBCnstr00005966
Microarray_resultsGPL8303_CB6_WBGene00023596_A
GPL8303_CB6_WBGene00023596_B
GPL14143_CBG00120_1093-1152_0.796_20_B
GPL14143_CBG00120_3499-3558_0.763_140_C
GPL14143_CBG00120_4805-4864_0.798_12_A
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_upregulated
WBPaper00051425:CB_L4_vs_embryo_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
ReferenceWBPaper00032323
Remark[180319 gw3] The CGC name Cbr-myo-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene