WormBase Tree Display for Gene: WBGene00022146
expand all nodes | collapse all nodes | view schema
WBGene00022146 | SMap | S_parent | Sequence | Y71G12B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | rml-5 | |||||||
Sequence_name | Y71G12B.6 | ||||||||
Molecular_name | Y71G12B.6a | ||||||||
Y71G12B.6a.1 | |||||||||
CE29138 | |||||||||
Y71G12B.6b | |||||||||
CE49584 | |||||||||
Y71G12B.6b.1 | |||||||||
Other_name | CELE_Y71G12B.6 | Accession_evidence | NDB | BX284601 | |||||
Public_name | rml-5 | ||||||||
DB_info | Database | AceView | gene | 1C269 | |||||
WormQTL | gene | WBGene00022146 | |||||||
WormFlux | gene | WBGene00022146 | |||||||
NDB | locus_tag | CELE_Y71G12B.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022146|UniProtKB=Q95XM5 | |||||||
family | PTHR43245 | ||||||||
NCBI | gene | 171744 | |||||||
RefSeq | protein | NM_001306508.3 | |||||||
NM_058494.7 | |||||||||
TrEMBL | UniProtAcc | W6RS16 | |||||||
Q95XM5 | |||||||||
UniProt_GCRP | UniProtAcc | Q95XM5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 30 Jul 2020 16:56:18 | WBPerson1983 | Name_change | CGC_name | rml-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rml | ||||||||
Allele (73) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (25) | |||||||||
Paralog (13) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; anterior hypodermis; and male distal tip cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including myrf-1; nuo-6; and numr-2 based on microarray; RNA-seq; and proteomic studies. Is affected by fourteen chemicals including mianserin; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: GDP-mannose 4,6 dehydratase; NAD(P)-binding domain superfamily; and NAD(P)-binding domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y71G12B.6a | |||||||
Y71G12B.6b | |||||||||
Corresponding_transcript | Y71G12B.6a.1 | ||||||||
Y71G12B.6b.1 | |||||||||
Other_sequence | CJC11020_1 | ||||||||
CJC01382_1 | |||||||||
CR05809 | |||||||||
SR05117 | |||||||||
CRC07867_1 | |||||||||
CGC00376_1 | |||||||||
JI460883.1 | |||||||||
CGC00990_1 | |||||||||
Associated_feature | WBsf643061 | ||||||||
WBsf217248 | |||||||||
Experimental_info | RNAi_result | WBRNAi00058222 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1026397 | ||||||||
Expr1039753 | |||||||||
Expr1161641 | |||||||||
Expr2008312 | |||||||||
Expr2026552 | |||||||||
Construct_product | WBCnstr00016531 | ||||||||
WBCnstr00016532 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (170) | |||||||||
Interaction (11) | |||||||||
Map_info | Map | I | Position | -12.8315 | |||||
Positive | Positive_clone | Y71G12B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00065106 | ||||||||
Remark | [2020-07-30T16:56:18.535Z WBPerson1983] Gene Updated: Releasing from confidential | Curator_confirmed | WBPerson1983 | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |