WormBase Tree Display for Gene: WBGene00022103
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WBGene00022103 | SMap | S_parent | Sequence | CHROMOSOME_III | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cdh | ||||||
Allele (818) | |||||||
Strain | WBStrain00032839 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00003539 | ||||||
00003540 | |||||||
00003541 | |||||||
00121029 | |||||||
00121030 | |||||||
00121031 | |||||||
00121032 | |||||||
Ortholog (22) | |||||||
Paralog | WBGene00001475 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00001980 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00017576 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00000395 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000396 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000397 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000399 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000401 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000402 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00019994 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | cdh-12 encodes a cadherin; by sequence similarity, CDH-12 is predicted to function in cellular adhesion. | Paper_evidence | WBPaper00004508 | |||
WBPaper00005654 | |||||||
WBPaper00024497 | |||||||
WBPaper00025054 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 26 Apr 2012 00:00:00 | ||||||
Automated_description | Predicted to enable calcium ion binding activity. Predicted to be involved in cell-cell adhesion. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y71D11A.1a | |||||
Y71D11A.1b | |||||||
Corresponding_CDS_history | Y71D11A.1:wp138 | ||||||
Y71D11A.1:wp216 | |||||||
Y71D11A.1:wp234 | |||||||
Y71D11A.1:wp271 | |||||||
Corresponding_transcript | Y71D11A.1a.1 | ||||||
Y71D11A.1b.1 | |||||||
Other_sequence (139) | |||||||
Associated_feature | WBsf658601 | ||||||
WBsf991237 | |||||||
WBsf991238 | |||||||
WBsf991239 | |||||||
WBsf991240 | |||||||
WBsf991241 | |||||||
WBsf991242 | |||||||
WBsf1014186 | |||||||
Experimental_info | RNAi_result | WBRNAi00020001 | Inferred_automatically | RNAi_primary | |||
WBRNAi00058621 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058139 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037914 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019994 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00065252 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058620 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019992 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012002 | ||||||
Expr1039722 | |||||||
Expr1161564 | |||||||
Expr2009799 | |||||||
Expr2028039 | |||||||
Microarray_results (40) | |||||||
Expression_cluster (250) | |||||||
Interaction (12) | |||||||
Map_info | Map | III | Position | -22.6639 | Error | 0.009974 | |
Positive | Positive_clone | Y71D11A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |