WormBase Tree Display for Gene: WBGene00022101
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WBGene00022101 | SMap | S_parent | Sequence | Y69A2AR | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y69A2AR.32 | |||||||
Molecular_name | Y69A2AR.32a | ||||||||
Y69A2AR.32a.1 | |||||||||
CE36368 | |||||||||
Y69A2AR.32b | |||||||||
CE36369 | |||||||||
Y69A2AR.32c | |||||||||
CE48965 | |||||||||
Y69A2AR.32b.1 | |||||||||
Y69A2AR.32c.1 | |||||||||
Other_name | CELE_Y69A2AR.32 | Accession_evidence | NDB | BX284604 | |||||
Public_name | Y69A2AR.32 | ||||||||
DB_info | Database | AceView | gene | 4D375 | |||||
WormQTL | gene | WBGene00022101 | |||||||
WormFlux | gene | WBGene00022101 | |||||||
NDB | locus_tag | CELE_Y69A2AR.32 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022101|UniProtKB=H2L0S1 | |||||||
family | PTHR11208 | ||||||||
NCBI | gene | 177042 | |||||||
RefSeq | protein | NM_171289.6 | |||||||
NM_171290.6 | |||||||||
NM_001380098.1 | |||||||||
TrEMBL | UniProtAcc | H2L0S1 | |||||||
U4PCF9 | |||||||||
Q8T871 | |||||||||
UniProt_GCRP | UniProtAcc | H2L0S1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (33) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00022115 | ||||||||
00022116 | |||||||||
00022117 | |||||||||
00022118 | |||||||||
00022119 | |||||||||
00080770 | |||||||||
00121024 | |||||||||
00121025 | |||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00001595 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00006423 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010046 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00013325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00013808 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00017098 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00019509 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00044674 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00304811 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in regulation of mRNA splicing, via spliceosome. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y69A2AR.32a | |||||||
Y69A2AR.32b | |||||||||
Y69A2AR.32c | |||||||||
Corresponding_transcript | Y69A2AR.32a.1 | ||||||||
Y69A2AR.32b.1 | |||||||||
Y69A2AR.32c.1 | |||||||||
Other_sequence | HC06277 | ||||||||
EX543934.1 | |||||||||
EX546114.1 | |||||||||
CJC13051_1 | |||||||||
CBC11526_1 | |||||||||
HCC02924_1 | |||||||||
TIC00325_1 | |||||||||
AJ616599.1 | |||||||||
Associated_feature | WBsf645840 | ||||||||
WBsf645841 | |||||||||
WBsf660000 | |||||||||
WBsf228036 | |||||||||
Experimental_info | RNAi_result | WBRNAi00058047 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002306 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021312 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058052 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021474 | ||||||||
Expr1039721 | |||||||||
Expr1161469 | |||||||||
Expr2008229 | |||||||||
Expr2026471 | |||||||||
Drives_construct | WBCnstr00024345 | ||||||||
Construct_product | WBCnstr00024345 | ||||||||
Microarray_results (33) | |||||||||
Expression_cluster (111) | |||||||||
SAGE_tag | SAGE:aattgctcaccttcggg | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
SAGE:ccacgtggcccgagaat | Strand | Antisense | |||||||
SAGE:aaacgtggca | Strand | Antisense | |||||||
SAGE:ggaggcgagcagtgttt | Strand | Antisense | |||||||
SAGE:ccgtggaagt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:ctcattggat | Strand | Antisense | |||||||
SAGE:aattgctcac | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:ccacgtggcc | Strand | Antisense | |||||||
SAGE:aaacgtggcaattctgg | Strand | Antisense | |||||||
Map_info | Positive | Positive_clone | Y69A2AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | -7.05924 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00060161 | |||||||||
Method | Gene |