WormBase Tree Display for Gene: WBGene00022008
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| WBGene00022008 | SMap | S_parent | Sequence | Y59H11AM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y59H11AM.4 | |||||||
| Molecular_name | Y59H11AM.4 | ||||||||
| Y59H11AM.4.1 | |||||||||
| CE25518 | |||||||||
| Other_name | Y59H11AM.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y59H11AM.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y59H11AM.4 | ||||||||
| DB_info | Database | AceView | gene | 4J334 | |||||
| WormQTL | gene | WBGene00022008 | |||||||
| WormFlux | gene | WBGene00022008 | |||||||
| NDB | locus_tag | CELE_Y59H11AM.4 | |||||||
| NCBI | gene | 190426 | |||||||
| RefSeq | protein | NM_069062.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322420 | |||||||
| TrEMBL | UniProtAcc | Q95XU8 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XU8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00067777 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| chrIV_pilon.g11106 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00016177 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00044238 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell; head mesodermal cell; and in male based on RNA-seq studies. Is affected by several genes including cyc-1; nuo-6; and atfs-1 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; Tunicamycin; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y59H11AM.4 | |||||||
| Corresponding_transcript | Y59H11AM.4.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057783 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037639 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029068 | ||||||||
| Expr1161214 | |||||||||
| Expr2008105 | |||||||||
| Expr2026344 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (105) | |||||||||
| Map_info | Positive | Positive_clone | Y59H11AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.90422 | |||||||
| Method | Gene |
