WormBase Tree Display for Gene: WBGene00021880
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| WBGene00021880 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54G2A.15 | |||||||
| Molecular_name | Y54G2A.15 | ||||||||
| Y54G2A.15.1 | |||||||||
| CE25465 | |||||||||
| Other_name | Y54G2A.w | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y54G2A.15 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y54G2A.15 | ||||||||
| DB_info | Database | AceView | gene | 4D608 | |||||
| WormQTL | gene | WBGene00021880 | |||||||
| WormFlux | gene | WBGene00021880 | |||||||
| NDB | locus_tag | CELE_Y54G2A.15 | |||||||
| NCBI | gene | 177066 | |||||||
| RefSeq | protein | NM_067860.3 | |||||||
| TrEMBL | UniProtAcc | Q9N3B8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3B8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIV_pilon.g9877 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00016336 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in amphid sheath cell; seam cell; and in male based on RNA-seq studies. Is affected by several genes including mut-16; nuo-6; and atfs-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including methylmercuric chloride; allantoin; and Sirolimus based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G2A.15 | |||||||
| Corresponding_transcript | Y54G2A.15.1 | ||||||||
| Associated_feature | WBsf995795 | ||||||||
| WBsf1016967 | |||||||||
| WBsf1016968 | |||||||||
| WBsf229838 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037498 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00085871 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057443 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057442 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016306 | ||||||||
| Expr1160878 | |||||||||
| Expr2007935 | |||||||||
| Expr2026177 | |||||||||
| Drives_construct | WBCnstr00024418 | ||||||||
| Construct_product | WBCnstr00024418 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (143) | |||||||||
| Interaction | WBInteraction000503302 | ||||||||
| Map_info | Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -6.73003 | |||||||
| Method | Gene |
