WormBase Tree Display for Gene: WBGene00021841
expand all nodes | collapse all nodes | view schema
| WBGene00021841 | SMap | S_parent | Sequence | Y54E10BR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54E10BR.2 | |||||||
| Molecular_name | Y54E10BR.2 | ||||||||
| Y54E10BR.2.1 | |||||||||
| CE22471 | |||||||||
| Y54E10BR.2.2 | |||||||||
| Y54E10BR.2.3 | |||||||||
| Other_name | Y54E10BR.i | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y54E10BR.2 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | Y54E10BR.2 | ||||||||
| DB_info | Database | AceView | gene | 1D601 | |||||
| WormQTL | gene | WBGene00021841 | |||||||
| WormFlux | gene | WBGene00021841 | |||||||
| NDB | locus_tag | CELE_Y54E10BR.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021841|UniProtKB=Q9N3C8 | |||||||
| family | PTHR45909 | ||||||||
| NCBI | gene | 171878 | |||||||
| RefSeq | protein | NM_058693.7 | |||||||
| TREEFAM | TREEFAM_ID | TF105788 | |||||||
| TrEMBL | UniProtAcc | Q9N3C8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3C8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (39) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097211 | ||||||||
| 00097212 | |||||||||
| 00097213 | |||||||||
| 00097214 | |||||||||
| 00097215 | |||||||||
| 00097216 | |||||||||
| 00097217 | |||||||||
| 00097218 | |||||||||
| 00129952 | |||||||||
| 00129953 | |||||||||
| Ortholog (33) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in Golgi to plasma membrane protein transport; intracellular protein transport; and protein localization to Golgi apparatus. Predicted to be located in Golgi apparatus. Is an ortholog of human ARFRP1 (ARF related protein 1). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E10BR.2 | |||||||
| Corresponding_transcript | Y54E10BR.2.1 | ||||||||
| Y54E10BR.2.2 | |||||||||
| Y54E10BR.2.3 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf643128 | ||||||||
| WBsf656102 | |||||||||
| WBsf217363 | |||||||||
| WBsf217364 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004739 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00099104 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108672 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076818 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057360 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108597 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037466 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061938 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117112 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020875 | ||||||||
| Expr1039585 | |||||||||
| Expr1160797 | |||||||||
| Expr2007892 | |||||||||
| Expr2026134 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (91) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Positive | Positive_clone | Y54E10BR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -4.63386 | |||||||
| Reference | WBPaper00027646 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00050606 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
