WormBase Tree Display for Gene: WBGene00021830
expand all nodes | collapse all nodes | view schema
| WBGene00021830 | SMap | S_parent | Sequence | Y54E10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54E10A.10 | |||||||
| Molecular_name | Y54E10A.10 | ||||||||
| Y54E10A.10.1 | |||||||||
| CE24439 | |||||||||
| Other_name | CELE_Y54E10A.10 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y54E10A.10 | ||||||||
| DB_info | Database | AceView | gene | 1D742 | |||||
| WormQTL | gene | WBGene00021830 | |||||||
| WormFlux | gene | WBGene00021830 | |||||||
| NDB | locus_tag | CELE_Y54E10A.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021830|UniProtKB=Q9N3F0 | |||||||
| family | PTHR12728 | ||||||||
| NCBI | gene | 171892 | |||||||
| RefSeq | protein | NM_058716.9 | |||||||
| SwissProt | UniProtAcc | Q9N3F0 | |||||||
| TREEFAM | TREEFAM_ID | TF314371 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3F0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097292 | ||||||||
| 00097293 | |||||||||
| 00097294 | |||||||||
| 00097295 | |||||||||
| 00097296 | |||||||||
| 00129941 | |||||||||
| 00129942 | |||||||||
| 00129943 | |||||||||
| 00129944 | |||||||||
| Contained_in_operon | CEOP1916 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable rRNA binding activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleolus. Is an ortholog of human RPF2 (ribosome production factor 2 homolog). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E10A.10 | |||||||
| Corresponding_transcript | Y54E10A.10.1 | ||||||||
| Other_sequence (63) | |||||||||
| Associated_feature | WBsf983078 | ||||||||
| WBsf983079 | |||||||||
| WBsf219106 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr1010513 | ||||||||
| Expr1039577 | |||||||||
| Expr1160775 | |||||||||
| Expr2007885 | |||||||||
| Expr2026126 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (239) | |||||||||
| Map_info | Positive | Positive_clone | Y54E10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -4.47352 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
