WormBase Tree Display for Gene: WBGene00021271
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WBGene00021271 | SMap | S_parent | Sequence | Y23H5A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | spe-47 | Person_evidence | WBPerson354 | |||||
Sequence_name | Y23H5A.4 | ||||||||
Molecular_name | Y23H5A.4a | ||||||||
Y23H5A.4a.1 | |||||||||
CE18360 | |||||||||
Y23H5A.4b | |||||||||
CE49907 | |||||||||
Y23H5A.4b.1 | |||||||||
Other_name | CELE_Y23H5A.4 | Accession_evidence | NDB | BX284601 | |||||
Public_name | spe-47 | ||||||||
DB_info | Database | AceView | gene | 1D187 | |||||
WormQTL | gene | WBGene00021271 | |||||||
WormFlux | gene | WBGene00021271 | |||||||
NDB | locus_tag | CELE_Y23H5A.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021271|UniProtKB=O76615 | |||||||
family | PTHR22920 | ||||||||
NCBI | gene | 189522 | |||||||
RefSeq | protein | NM_001306358.3 | |||||||
NM_058609.3 | |||||||||
TrEMBL | UniProtAcc | A0A061AKN6 | |||||||
O76615 | |||||||||
UniProt_GCRP | UniProtAcc | O76615 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 02 Sep 2013 15:25:46 | WBPerson2970 | Name_change | CGC_name | spe-47 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | spe | ||||||||
Allele (68) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00036549 | ||||||||
00036550 | |||||||||
00036551 | |||||||||
00036552 | |||||||||
00036553 | |||||||||
00036554 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00012979 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to be located in cytoplasm; cytoskeleton; and pseudopodium. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y23H5A.4a | |||||||
Y23H5A.4b | |||||||||
Corresponding_transcript | Y23H5A.4a.1 | ||||||||
Y23H5A.4b.1 | |||||||||
Associated_feature | WBsf656067 | ||||||||
WBsf982917 | |||||||||
WBsf217317 | |||||||||
Experimental_info | RNAi_result | WBRNAi00004564 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036719 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055700 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022433 | ||||||||
Expr1159224 | |||||||||
Expr2016045 | |||||||||
Expr2034280 | |||||||||
Drives_construct | WBCnstr00024599 | ||||||||
Construct_product | WBCnstr00020855 | ||||||||
WBCnstr00020856 | |||||||||
WBCnstr00020857 | |||||||||
WBCnstr00020858 | |||||||||
WBCnstr00024599 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (131) | |||||||||
Interaction | WBInteraction000032226 | ||||||||
WBInteraction000137671 | |||||||||
WBInteraction000193100 | |||||||||
WBInteraction000516109 | |||||||||
WBInteraction000520376 | |||||||||
WBInteraction000520377 | |||||||||
WBInteraction000546967 | |||||||||
WBInteraction000547913 | |||||||||
WBInteraction000560625 | |||||||||
Map_info | Map | I | Position | -8.15246 | |||||
Positive | Positive_clone | Y23H5A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00043752 | ||||||||
WBPaper00043761 | |||||||||
WBPaper00048201 | |||||||||
WBPaper00048204 | |||||||||
WBPaper00048499 | |||||||||
WBPaper00052150 | |||||||||
WBPaper00057911 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |