WormBase Tree Display for Gene: WBGene00021101
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WBGene00021101 | SMap | S_parent | Sequence | W08F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | W08F4.12 | |||||||
Molecular_name | W08F4.12a | ||||||||
W08F4.12a.1 | |||||||||
CE51073 | |||||||||
W08F4.12b | |||||||||
CE51085 | |||||||||
W08F4.12b.1 | |||||||||
W08F4.12c | |||||||||
W08F4.12d | |||||||||
Other_name | CELE_W08F4.12 | Accession_evidence | NDB | BX284602 | |||||
Public_name | W08F4.12 | ||||||||
DB_info | Database | AceView | gene | 2A874 | |||||
WormQTL | gene | WBGene00021101 | |||||||
WormFlux | gene | WBGene00021101 | |||||||
NDB | locus_tag | CELE_W08F4.12 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021101|UniProtKB=A0A0M9JJE0 | |||||||
family | PTHR22899 | ||||||||
NCBI | gene | 173451 | |||||||
RefSeq | protein | NM_001316869.4 | |||||||
NM_001316870.2 | |||||||||
NR_133624.1 | |||||||||
NR_133623.1 | |||||||||
TrEMBL | UniProtAcc | A0A0M7RF88 | |||||||
A0A0M9JJE0 | |||||||||
UniProt_GCRP | UniProtAcc | A0A0M9JJE0 | |||||||
RNAcentral | URSid | URS00008E02D1 | |||||||
URS00008E2D9D | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (49) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | chrII_pilon.g3140 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog (142) | |||||||||
Structured_description | Automated_description | Enriched in body wall muscle cell; neurons; and retrovesicular ganglion based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including hsb-1; drh-3; and srbc-48 based on microarray and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; rotenone; and sodium arsenite based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: F-box domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W08F4.12a | |||||||
W08F4.12b | |||||||||
Corresponding_CDS_history | W08F4.12:wp250 | ||||||||
Corresponding_transcript (4) | |||||||||
Associated_feature | WBsf649829 | ||||||||
WBsf986446 | |||||||||
WBsf222616 | |||||||||
Experimental_info | RNAi_result | WBRNAi00096474 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00096656 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019650 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00096557 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055006 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00096391 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054999 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033566 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022462 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027443 | ||||||||
Expr1158530 | |||||||||
Expr2006863 | |||||||||
Expr2025088 | |||||||||
Microarray_results (27) | |||||||||
Expression_cluster (87) | |||||||||
Interaction | WBInteraction000547839 | ||||||||
WBInteraction000548743 | |||||||||
Map_info | Positive | Positive_clone | W08F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -15.5942 | |||||||
Method | Gene |