WormBase Tree Display for Gene: WBGene00020869
expand all nodes | collapse all nodes | view schema
| WBGene00020869 | SMap | S_parent | Sequence | T28A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | T28A11.2 | |||||||
| Molecular_name | T28A11.2 | ||||||||
| T28A11.2.1 | |||||||||
| CE41030 | |||||||||
| Other_name | CELE_T28A11.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T28A11.2 | ||||||||
| DB_info | Database | AceView | gene | 5D755 | |||||
| WormQTL | gene | WBGene00020869 | |||||||
| WormFlux | gene | WBGene00020869 | |||||||
| NDB | locus_tag | CELE_T28A11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020869|UniProtKB=A5HU97 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 189009 | |||||||
| RefSeq | protein | NM_001380624.2 | |||||||
| TrEMBL | UniProtAcc | A5HU97 | |||||||
| UniProt_GCRP | UniProtAcc | A5HU97 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Dec 2015 10:52:05 | WBPerson4025 | Event | Split_into | WBGene00269355 | ||||
| Split_into | WBGene00269355 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (87) | |||||||||
| Structured_description | Automated_description | Enriched in PLM; body wall musculature; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including hyl-2; swsn-1; and nuo-6 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by thirteen chemicals including 1-methylnicotinamide; rotenone; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: T20D4.11-like domain; Domain of unknown function (DUF19); and Uncharacterised protein family UPF0376. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28A11.2 | |||||||
| Corresponding_CDS_history | T28A11.2:wp175 | ||||||||
| T28A11.2a:wp251 | |||||||||
| Corresponding_transcript | T28A11.2.1 | ||||||||
| Associated_feature | WBsf231560 | ||||||||
| WBsf231561 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040763 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036059 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115923 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054361 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019363 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1157907 | ||||||||
| Expr2006590 | |||||||||
| Expr2024806 | |||||||||
| Drives_construct | WBCnstr00024824 | ||||||||
| Construct_product | WBCnstr00024824 | ||||||||
| Microarray_results | SMD_T28A11.2 | ||||||||
| 181325_s_at | |||||||||
| A_12_P139655 | |||||||||
| GPL19516_CGZ0005012 | |||||||||
| GPL19516_CGZ0037358 | |||||||||
| GPL21109_C17B7.2 | |||||||||
| GPL21109_T28A11.2b | |||||||||
| GPL8673_T28A11_2P00107 | |||||||||
| Expression_cluster (225) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Positive | Positive_clone | T28A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -12.3574 | |||||||
| Reference | WBPaper00061876 | ||||||||
| WBPaper00066610 | |||||||||
| WBPaper00066635 | |||||||||
| Method | Gene |
