WormBase Tree Display for Gene: WBGene00020802
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WBGene00020802 | SMap | S_parent | Sequence | T25D10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | btb-2 | Person_evidence | WBPerson261 | |||||
Sequence_name | T25D10.5 | ||||||||
Molecular_name | T25D10.5 | ||||||||
T25D10.5.1 | |||||||||
CE32214 | |||||||||
Other_name | CELE_T25D10.5 | Accession_evidence | NDB | BX284602 | |||||
Public_name | btb-2 | ||||||||
DB_info | Database | AceView | gene | 2G691 | |||||
WormQTL | gene | WBGene00020802 | |||||||
WormFlux | gene | WBGene00020802 | |||||||
NDB | locus_tag | CELE_T25D10.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020802|UniProtKB=Q8IFY9 | |||||||
family | PTHR22744 | ||||||||
NCBI | gene | 174061 | |||||||
RefSeq | protein | NM_182195.5 | |||||||
TREEFAM | TREEFAM_ID | TF322195 | |||||||
TrEMBL | UniProtAcc | Q8IFY9 | |||||||
UniProt_GCRP | UniProtAcc | Q8IFY9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | btb-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | btb | ||||||||
Allele (18) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (37) | |||||||||
Paralog (29) | |||||||||
Structured_description | Automated_description | Enriched in M.vrpaapaa; M.vrpaapap; head mesodermal cell; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including numr-2; numr-1; and mut-16 based on microarray; RNA-seq; and tiling array studies. Is affected by sixteen chemicals including methylmercuric chloride; Tunicamycin; and manganese chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: BTB/POZ domain and SKP1/BTB/POZ domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T25D10.5 | |||||||
Corresponding_transcript | T25D10.5.1 | ||||||||
Associated_feature | WBsf221438 | ||||||||
WBsf221439 | |||||||||
Experimental_info | RNAi_result | WBRNAi00054126 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019207 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026728 | ||||||||
Expr1157672 | |||||||||
Expr2009671 | |||||||||
Expr2027910 | |||||||||
Drives_construct | WBCnstr00024874 | ||||||||
Construct_product | WBCnstr00024874 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (127) | |||||||||
Map_info | Map | II | Position | -0.347003 | Error | 0.012322 | |||
Positive | Positive_clone | T25D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |