WormBase Tree Display for Gene: WBGene00020707
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| WBGene00020707 | SMap | S_parent | Sequence | T22H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | wago-10 | Paper_evidence | WBPaper00035262 | |||||
| Person_evidence | WBPerson419 | ||||||||
| Sequence_name | T22H9.3 | ||||||||
| Molecular_name | T22H9.3 | ||||||||
| T22H9.3.1 | |||||||||
| CE20101 | |||||||||
| Other_name | CELE_T22H9.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | wago-10 | ||||||||
| DB_info | Database | AceView | gene | 5A825 | |||||
| WormQTL | gene | WBGene00020707 | |||||||
| WormFlux | gene | WBGene00020707 | |||||||
| NDB | locus_tag | CELE_T22H9.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020707|UniProtKB=Q9TXN7 | |||||||
| family | PTHR22891 | ||||||||
| NCBI | gene | 178560 | |||||||
| RefSeq | protein | NM_070776.5 | |||||||
| TREEFAM | TREEFAM_ID | TF318801 | |||||||
| TrEMBL | UniProtAcc | Q9TXN7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TXN7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 14 Oct 2011 15:24:19 | WBPerson2970 | Name_change | CGC_name | wago-10 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | wago | ||||||||
| Allele (106) | |||||||||
| Strain | WBStrain00054818 | ||||||||
| WBStrain00054835 | |||||||||
| WBStrain00054838 | |||||||||
| WBStrain00054840 | |||||||||
| WBStrain00040462 | |||||||||
| In_cluster | conserved_RDE-1_cluster | ||||||||
| conserved_miRNA_siRNA_cluster | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00100862 | ||||||||
| 00100863 | |||||||||
| 00100864 | |||||||||
| 00100865 | |||||||||
| 00100866 | |||||||||
| 00100867 | |||||||||
| 00100868 | |||||||||
| 00100869 | |||||||||
| 00129187 | |||||||||
| 00129188 | |||||||||
| Ortholog (54) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA endonuclease activity; miRNA binding activity; and single-stranded RNA binding activity. Predicted to be involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Predicted to be located in cytoplasmic ribonucleoprotein granule and nucleus. Predicted to be part of RISC complex. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T22H9.3 | |||||||
| Corresponding_transcript | T22H9.3.1 | ||||||||
| Associated_feature | WBsf999139 | ||||||||
| WBsf231314 | |||||||||
| WBsf231315 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053879 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019052 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr16417 | ||||||||
| Expr1010837 | |||||||||
| Expr1039020 | |||||||||
| Expr1157426 | |||||||||
| Expr2036179 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (205) | |||||||||
| Interaction | WBInteraction000162827 | ||||||||
| WBInteraction000343560 | |||||||||
| WBInteraction000575700 | |||||||||
| Map_info | Map | V | Position | -20.0025 | |||||
| Positive | Positive_clone | T22H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004772 | ||||||||
| WBPaper00028800 | |||||||||
| WBPaper00043989 | |||||||||
| WBPaper00046160 | |||||||||
| WBPaper00061753 | |||||||||
| WBPaper00065028 | |||||||||
| WBPaper00066122 | |||||||||
| WBPaper00066285 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
