WormBase Tree Display for Gene: WBGene00020377
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| WBGene00020377 | SMap | S_parent | Sequence | T09B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T09B4.3 | |||||||
| Molecular_name | T09B4.3 | ||||||||
| T09B4.3.1 | |||||||||
| CE46869 | |||||||||
| T09B4.3.2 | |||||||||
| Other_name | CELE_T09B4.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T09B4.3 | ||||||||
| DB_info | Database | AceView | gene | 1G753 | |||||
| WormQTL | gene | WBGene00020377 | |||||||
| WormFlux | gene | WBGene00020377 | |||||||
| NDB | locus_tag | CELE_T09B4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020377|UniProtKB=H1ZUX2 | |||||||
| family | PTHR31128 | ||||||||
| NCBI | gene | 188315 | |||||||
| RefSeq | protein | NM_001383208.1 | |||||||
| TrEMBL | UniProtAcc | H1ZUX2 | |||||||
| UniProt_GCRP | UniProtAcc | H1ZUX2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00033481 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| Inparanoid_8 | |||||||||
| WBGene00064278 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| chrI_pilon.g1089 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00274501 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00009321 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009643 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009705 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013590 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015034 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015820 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00044684 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including amphid sheath cell; body wall muscle cell; head mesodermal cell; pharyngeal muscle cell; and ut4 based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including numr-2; numr-1; and nuo-6 based on tiling array; RNA-seq; and microarray studies. Is affected by eleven chemicals including manganese chloride; multi-walled carbon nanotube; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T09B4.3 | |||||||
| Corresponding_CDS_history | T09B4.3a:wp277 | ||||||||
| T09B4.3b:wp277 | |||||||||
| Corresponding_transcript | T09B4.3.1 | ||||||||
| T09B4.3.2 | |||||||||
| Associated_feature | WBsf656367 | ||||||||
| WBsf656368 | |||||||||
| WBsf983856 | |||||||||
| WBsf1009913 | |||||||||
| WBsf217762 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035383 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052931 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004179 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025388 | ||||||||
| Expr1038880 | |||||||||
| Expr1156533 | |||||||||
| Expr2006029 | |||||||||
| Expr2024244 | |||||||||
| Drives_construct | WBCnstr00025180 | ||||||||
| Construct_product | WBCnstr00025180 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction | WBInteraction000277899 | ||||||||
| WBInteraction000278211 | |||||||||
| WBInteraction000322137 | |||||||||
| WBInteraction000353448 | |||||||||
| WBInteraction000430927 | |||||||||
| Map_info | Positive | Positive_clone | T09B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.871061 | |||||||
| Reference | WBPaper00048759 | ||||||||
| Method | Gene |
