WormBase Tree Display for Gene: WBGene00019972

WBGene00019972 SMap: S_parent: Sequence: R09A1
  Identity: Version: 2
    Name: CGC_name: pei-2 Person_evidence: WBPerson1159
      Sequence_name: R09A1.2
      Molecular_name (12)
      Other_name: CELE_R09A1.2 Accession_evidence: NDB BX284605
      Public_name: pei-2
    DB_info: Database: AceView gene 5B498
        WormQTL gene WBGene00019972
        WormFlux gene WBGene00019972
        NDB locus_tag CELE_R09A1.2
        Panther gene CAEEL|WormBase=WBGene00019972|UniProtKB=A0A0K3AS98
          family PTHR22670
        NCBI gene 178603
        RefSeq protein NM_001313239.3
            NR_132495.1
            NM_001313238.2
            NR_132494.1
            NM_001313240.3
        TrEMBL UniProtAcc A0A0K3AS98
            A0A0K3AY27
            A0A0K3AVT4
        UniProt_GCRP UniProtAcc A0A0K3AS98
        RNAcentral URSid URS0000845F07
            URS0000848CA9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 11 Mar 2021 09:37:10 WBPerson1983 Name_change: CGC_name: pei-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pei
    Allele (157)
    RNASeq_FPKM (74)
    Ortholog (21)
    Paralog: WBGene00009185 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015937 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020404 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016947 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABalaaaala; ABalaapaaa; ABplpppaaa; RID; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including nuo-6; rsr-2; and csr-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including methylmercuric chloride; D-glucose; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: R09A1.2a
      R09A1.2b
      R09A1.2c
    Corresponding_CDS_history: R09A1.2:wp248
    Corresponding_transcript: R09A1.2d
      R09A1.2e
      R09A1.2a.1
      R09A1.2a.2
      R09A1.2b.1
      R09A1.2c.1
    Other_sequence: CBC04597_1
    Associated_feature: WBsf999239
      WBsf1019123
      WBsf1019124
      WBsf233310
  Experimental_info: RNAi_result: WBRNAi00000382 Inferred_automatically: RNAi_primary
      WBRNAi00017616 Inferred_automatically: RNAi_primary
      WBRNAi00034759 Inferred_automatically: RNAi_primary
      WBRNAi00051578 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027261
      Expr1155251
      Expr2005503
      Expr2023722
    Drives_construct: WBCnstr00025456
    Construct_product: WBCnstr00025456
    Microarray_results (18)
    Expression_cluster (135)
    Interaction (28)
  Map_info: Map: V Position: -19.8696
    Positive: Positive_clone: R09A1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00062506
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene