WormBase Tree Display for Gene: WBGene00019929
expand all nodes | collapse all nodes | view schema
| WBGene00019929 | SMap | S_parent | Sequence | R07C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R07C3.13 | |||||||
| Molecular_name | R07C3.13a | ||||||||
| R07C3.13a.1 | |||||||||
| CE51183 | |||||||||
| R07C3.13b | |||||||||
| Other_name | CELE_R07C3.13 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | R07C3.13 | ||||||||
| DB_info | Database | AceView | gene | 2B214 | |||||
| WormQTL | gene | WBGene00019929 | |||||||
| WormFlux | gene | WBGene00019929 | |||||||
| NDB | locus_tag | CELE_R07C3.13 | |||||||
| NCBI | gene | 187672 | |||||||
| RefSeq | protein | NM_061452.3 | |||||||
| NR_134553.1 | |||||||||
| TrEMBL | UniProtAcc | O16772 | |||||||
| UniProt_GCRP | UniProtAcc | O16772 | |||||||
| RNAcentral | URSid | URS0000A391FD | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g3235 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00013656 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00013657 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018506 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in several structures, including MSpppaaa; dorsal uterine cell; germ line; head mesodermal cell; and mu_int_L based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including nuo-6; atfs-1; and etr-1 based on tiling array; microarray; and RNA-seq studies. Is affected by twenty-five chemicals including methylmercuric chloride; rotenone; and manganese chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07C3.13a | |||||||
| Corresponding_CDS_history | R07C3.13:wp251 | ||||||||
| Corresponding_transcript | R07C3.13b | ||||||||
| R07C3.13a.1 | |||||||||
| Associated_feature | WBsf665341 | ||||||||
| WBsf665342 | |||||||||
| WBsf222642 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051452 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017534 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016965 | ||||||||
| Expr1155138 | |||||||||
| Expr2005453 | |||||||||
| Expr2023674 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (175) | |||||||||
| Interaction | WBInteraction000177394 | ||||||||
| WBInteraction000179104 | |||||||||
| WBInteraction000233974 | |||||||||
| WBInteraction000248137 | |||||||||
| WBInteraction000335152 | |||||||||
| Map_info | Positive | Positive_clone | R07C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.5852 | |||||||
| Method | Gene |
